Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0582
(734 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory pro... 27 0.21
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.27
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.84
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.84
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.84
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.84
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.84
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.84
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.84
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 22 5.9
>DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory
protein 20 protein.
Length = 124
Score = 26.6 bits (56), Expect = 0.21
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 320 RVSHLRC-DLQEHGGYDIADHGHTRPQDWRWKEFES 424
+ S +C D Q+ G + H + QDW WK+ E+
Sbjct: 71 KTSCAKCTDKQKQGAKTVIQHLYKNKQDW-WKQLEA 105
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.27
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T T ++SS T S+T K +N
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATST-TSQNLSSPASSTSSTSSTEKAGTN 185
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.84
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T ++ ++SS T S+T K +N
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ-NLSSPASSTSSTSSTEKAGTN 185
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.6 bits (51), Expect = 0.84
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T ++ ++SS T S+T K +N
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ-NLSSPASSTSSTSSTEKAGTN 185
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.84
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T ++ ++SS T S+T K +N
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ-NLSSPASSTSSTSSTEKAGTN 185
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.6 bits (51), Expect = 0.84
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T ++ ++SS T S+T K +N
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ-NLSSPASSTSSTSSTEKAGTN 185
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.6 bits (51), Expect = 0.84
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T ++ ++SS T S+T K +N
Sbjct: 87 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ-NLSSPASSTSSTSSTEKAGTN 141
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.84
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T ++ ++SS T S+T K +N
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ-NLSSPASSTSSTSSTEKAGTN 185
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.84
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGM---NPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP+ ++ T+++ +TSP S P+T+T ++ ++SS T S+T K +N
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ-NLSSPASSTSSTSSTEKAGTN 185
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -1
Query: 227 NDCLLASMLLNPYVFFKSLMILMIWSSYLSKDSYPVLMVGMLL*RSLS 84
N C S +N +F +++L+++ +YL S V M + RS +
Sbjct: 106 NCCSKKSFRMNFAIFNLYMVLLLLFDAYLWISSVGVRMFQYYIGRSFT 153
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,547
Number of Sequences: 336
Number of extensions: 3675
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -