Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0582
(734 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.52
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 29 0.91
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.91
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.91
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 3.7
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 27 3.7
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 4.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.8
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 26 4.8
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 26 6.4
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 26 6.4
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 6.4
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 8.5
SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomy... 25 8.5
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 25 8.5
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 25 8.5
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 8.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.5
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.52
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +2
Query: 68 PTYTSTTRNATITSPPSRLGMN----PSTNTRTKSSVSSMT*RT-HMDSTTSKPASNRCS 232
PT +STT +++ TS + G+N S N + SSV+S T + STT+ + S
Sbjct: 819 PTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSSVTSTAYTTDSVTSTTALTSQGPSS 878
Query: 233 IFLSDRVHQTLGLRYW*TVYRTMLPA 310
+S + T L V ++ PA
Sbjct: 879 SVVSSSLSSTTSLSTSIPVTSSVAPA 904
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 28.7 bits (61), Expect = 0.91
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 103 NIPTIKTGYESFDKYEDQIISIINDLKNTYGFNN 204
N+ K Y +F + I+ +N+L TYG++N
Sbjct: 312 NVVATKGSYNTFQGEAESAINNLNELLGTYGYSN 345
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.7 bits (61), Expect = 0.91
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
T TS TP + ++ N+T + S ++ S N+ T +S SS T T ++STT+ AS+
Sbjct: 315 TTTSASSTPLSSVSSANSTTATSTSSTPLS-SVNSTTATSASS-TPLTSVNSTTATSASS 372
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 28.7 bits (61), Expect = 0.91
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
S T +S+ TP STT +++ +S S + S+++ +KSS S + T +T+ K
Sbjct: 130 SSTTSSSSSATP---STTSSSSSSSSSSSSSSSKSSSSSSKSSSRSSSRTTSHRTTSHKS 186
Query: 215 ASNRCSIF 238
+S R ++F
Sbjct: 187 SSYRPTVF 194
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 88 KERYNNIPTIKTGYESFDKYEDQIISIINDLKNTYGFNNIEASKQSLFDLPVRPGASN 261
+ Y + ++ F E+ + D T GFNN+ K + LP RP ASN
Sbjct: 54 RAHYARMQQMRNQSSEFPDAENTNLRKQQDTLPTTGFNNLPEGKAGMQTLPGRP-ASN 110
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/87 (24%), Positives = 33/87 (37%)
Frame = +1
Query: 64 NAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISIINDLKNTYGFNNIEASKQSLFDLPV 243
N + +FDD YN G S YE + ++ Y I + S+ P
Sbjct: 356 NQNSYFDDS--YNQESCGFPGLNSLSSYEGNFEASFSNASMPYWIQTIAGEQASVSFFPN 413
Query: 244 RPGASNTWSSLLVNRVSDDASCSTQSS 324
+N LL+ + D +CS + S
Sbjct: 414 ITVPTNGTVQLLIPGCTYDNTCSQRGS 440
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 71 TYTSTT---RNATITSPPSRLGMNPSTNTRTKSSVSSMT 178
TY STT N+T T PP+ ST T T+++ + T
Sbjct: 175 TYNSTTSSYHNSTSTPPPTITSTKASTVTSTEATTVTTT 213
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 80 STTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCSIFLS 244
S++ ++T+TS PST++ + S+ SS++ + S+T+ +S+ SI S
Sbjct: 223 SSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLS--SSSSSSTASSSSSSSSIISS 275
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/56 (25%), Positives = 34/56 (60%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCS 232
+PT +S+T +++ +SP S + ++++++ SS SS + S+++ +S+ S
Sbjct: 335 SPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSS 390
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 68 PTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
PT S T +++ S S+ TR+ S+VSS + + + +SKP+S+
Sbjct: 540 PTRRSRTPIRSLSGRSSVASSRNSSRTRSYSNVSSASSNSLISIISSKPSSS 591
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 25.8 bits (54), Expect = 6.4
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 68 PTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSK-PASN 223
P+ ++ NA +S P R N + S+ SMT T D TS P+ N
Sbjct: 291 PSTLTSLFNAFFSSMPDRPSSNEPMTSNLTSNSGSMTNSTSTDLPTSNLPSQN 343
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 74 YTSTTRNATITSP-PSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
+ + T +TI+ P P+ M PS ++ S++S + STTS P+ N
Sbjct: 294 HQNETHGSTISVPNPNLSQMGPSHSSSVPSNLSPNPAQNENPSTTSIPSIN 344
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 6.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +2
Query: 62 KTPTYT-STTR---NATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
K P+Y S++R +A++ S P+R P T+ S V S + + S KP SN
Sbjct: 312 KAPSYPYSSSRPSASASLASSPTRSAFRPKTSETVSSEVVSSPPTSPLHSPV-KPVSN 368
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 8.5
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSS------VSSMT*RTHMDSTT 205
TLT T TY S T TIT PS ++ + NT SS V S+T + + T+
Sbjct: 420 TLTETILTTTYDSHTFLTTITPSPSN-SISYTNNTFIPSSSIKSSIVYSVTPTSAENYTS 478
Query: 206 SKPASNRCSIFLSDRVHQTL 265
S+ S S+ + V+ +L
Sbjct: 479 SEAFSTSSSLVVIPPVNSSL 498
>SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 372 LITATPDLKIGGGKNLNQVVGFSEHSVVLLGE 467
++ TPD +GG K+L Q V E+ +LLG+
Sbjct: 503 VLMLTPD--VGGTKSLEQYVNGWENRTLLLGD 532
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 204 VVESICVLQVIDDTDDLVLVFVEGFIPSLDGG 109
++E +C +V+ D +L E IPS DGG
Sbjct: 50 LLEYLCKPEVLSQLIDYILEVDETEIPSADGG 81
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITSP-PSRL--GMNPSTNTRTKSSVSSMT 178
T+N T T T+TT T T+P P+ N ST+ T++ S+ T
Sbjct: 145 TANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSNSTRNGTSAAT 190
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP YT A + S S P T+ + S + T +S++S PAS+
Sbjct: 113 TPLYTMDNVTAPVWSNTSVPVSTPETSATSSSEFFTSYPATSSESSSSYPASS 165
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 76 HFDDKERYNNIPTIKTGYESFDKYEDQIISIINDLKNTYG 195
+FD + Y+ IP+ TG SF + D I TYG
Sbjct: 962 NFDFRRPYSVIPSRMTGRSSFTQLSDDSDETIILASATYG 1001
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,096,705
Number of Sequences: 5004
Number of extensions: 64410
Number of successful extensions: 243
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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