Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0582
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0084 + 28260647-28262575                                         29   3.8  
11_06_0580 - 25184019-25184024,25184096-25184851,25184870-251849...    29   5.1  
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386...    29   5.1  
03_02_0899 + 12257831-12257858,12258490-12258561,12259121-122604...    29   5.1  
05_01_0509 - 4250217-4250240,4250617-4250711,4251050-4251365           28   8.8  
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076...    28   8.8  
02_05_1095 - 34076910-34077431                                         28   8.8  
02_04_0597 - 24198112-24198462,24199249-24199389,24200322-242005...    28   8.8  

>11_08_0084 + 28260647-28262575
          Length = 642

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
 Frame = +3

Query: 366 TSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKK---QTKDSETLRGTLRRQTIHA*T 536
           T L+   P+L+  G + +   +   EH + + G K+   ++K S + +   RR  IH   
Sbjct: 201 TKLMAPEPELEEEGARQMFDEMMLQEHEICMKGVKQLSLKSKSSSSKKARGRRTVIHT-- 258

Query: 537 LLKAPVATFSRRPTFEKLNAATAKAVSSRRAANTXTHKLPQRNS 668
               PV   +       L+ A A A   RR+A+    ++ Q +S
Sbjct: 259 ---EPVDLHNL-----LLHCAQAVATDDRRSAHELLRQIKQHSS 294


>11_06_0580 -
           25184019-25184024,25184096-25184851,25184870-25184927,
           25185306-25185376
          Length = 296

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -1

Query: 221 CLLASMLLNPYVFFKS----LMILMIWSSYLSKDSYPVLMVGML 102
           CL+   LL   VF K     ++ +++W +YLS DS  V ++G L
Sbjct: 40  CLVVVFLLFAAVFRKRCRSRVLSVLLWLAYLSADSVAVFVLGRL 83


>04_04_0844 -
           28637393-28638118,28638206-28638283,28638431-28638607,
           28639124-28639537
          Length = 464

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
 Frame = +2

Query: 26  HIRSCMTLTSN*KTPTYT---------STTRNATITSPPSRLGMNPSTNTRTKS-SVSSM 175
           H  SC ++TS  K+ +Y          STT   ++ SPPS +GM  + +    +  ++ +
Sbjct: 287 HHSSCSSMTSEQKSRSYATMPESPSKDSTTAQQSVPSPPS-VGMAEALSPLLMAVDIAEL 345

Query: 176 T*RTHMDSTTSKPASNRCSIF 238
                  S TS+P S+R   F
Sbjct: 346 CDSPQFFSATSRPGSSRSRAF 366


>03_02_0899 +
           12257831-12257858,12258490-12258561,12259121-12260413,
           12260593-12261224
          Length = 674

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 618 MKLLLLWPHSTSRKLVDEKT*PPVPSTKFTHESSVF 511
           +  L+ +P STSR +V  +      S KFTH+S V+
Sbjct: 527 LSALMSFPISTSRVVVGYRAPETFESRKFTHKSDVY 562


>05_01_0509 - 4250217-4250240,4250617-4250711,4251050-4251365
          Length = 144

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 4/33 (12%)
 Frame = -1

Query: 152 SSYLSKDSYPVL----MVGMLL*RSLSSKCTWA 66
           SS+  ++++P++    +VG LL R +++ CTWA
Sbjct: 78  SSFPDEETFPIVICETLVGYLLYRMINAGCTWA 110


>03_06_0448 -
           34005581-34005655,34005735-34005830,34006669-34007616,
           34007684-34007851,34007908-34008099,34008164-34008346,
           34008414-34008590,34008667-34012074
          Length = 1748

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -1

Query: 383 GRDQRCRNRHVLEDHIVNG*LDCVEQEASSDTRFTNSEDQVFDAPGLTGRSNNDCLLA 210
           G D+     H L    + G +DC+EQ            DQ  D PG   R+N+DC +A
Sbjct: 360 GNDELTSLAHCLRACELVG-MDCIEQYLPHRVAMQFGLDQ--DVPGDVQRANDDCRVA 414


>02_05_1095 - 34076910-34077431
          Length = 173

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 104 TSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCSI 235
           ++ P+R+ +      R   SVSS++ R+ M S T+ P S RCS+
Sbjct: 23  SASPTRVKL-AGGGARASVSVSSVSRRSCMCSPTNHPGSFRCSL 65


>02_04_0597 -
           24198112-24198462,24199249-24199389,24200322-24200537,
           24200626-24201561,24201655-24201816,24202026-24202304,
           24202399-24203171,24206142-24207363
          Length = 1359

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -3

Query: 240 RKIEQRLLAGFDVVESICVLQVIDDTDDLVLVFVEGFIPSLDGGDV 103
           RKI ++L A   VV  + VL   DD DDL     + FI S D  D+
Sbjct: 404 RKITEKLSASLIVVTQLQVLASDDDQDDL-STDPDDFIESEDSEDM 448


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,442,310
Number of Sequences: 37544
Number of extensions: 425047
Number of successful extensions: 1250
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)