Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0582
(734 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 34 0.10
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 34 0.14
SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_17243| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 32 0.55
SB_24194| Best HMM Match : RyR (HMM E-Value=5) 31 0.73
SB_23245| Best HMM Match : ApoC-I (HMM E-Value=5.7) 31 0.97
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 31 0.97
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_45896| Best HMM Match : ApoC-I (HMM E-Value=4) 29 3.0
SB_27235| Best HMM Match : ApoC-I (HMM E-Value=4) 29 3.0
SB_21999| Best HMM Match : ApoC-I (HMM E-Value=4) 29 3.0
SB_31678| Best HMM Match : ApoC-I (HMM E-Value=4) 29 3.0
SB_7314| Best HMM Match : ApoC-I (HMM E-Value=3.6) 29 3.0
SB_56948| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_44773| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 24 5.6
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65) 28 6.8
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_7751| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
S + TS TP+YTSTT + TS S +T+ + +S +S T T S T P
Sbjct: 157 SYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTPTP 216
Query: 215 ASNRCSIFLSDRVH 256
+ + + S ++
Sbjct: 217 SYTATTSYTSTTIY 230
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLG--MNPS-TNTRTKSSVSSMT* 181
TP S TS TP+YTSTT + TS S PS T+T + +S +S T
Sbjct: 125 TPSYTSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTS 184
Query: 182 RTHMDSTTS 208
T STTS
Sbjct: 185 TTSYTSTTS 193
Score = 32.3 bits (70), Expect = 0.42
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
S + TS T +YTSTT + TS PS T+T + +S +S T T STTS
Sbjct: 145 SYTSTTSYTSTTSYTSTT---SYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTS 199
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITSPPSRLGMNPS---TNTRTKSSVSSMT*RTHMDSTTS 208
TS TP+YTSTT + TS S P+ T+T + +S +S T T STTS
Sbjct: 159 TSYTPTPSYTSTTSYTSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTS 214
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPA 217
TP+YTSTT + TS P+ + + +S +S T T S T P+
Sbjct: 140 TPSYTSTTSYTSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTPTPS 190
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTR---NATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTT 205
S + TS T +YTSTT + TS PS T T + +S +S T T STT
Sbjct: 166 SYTSTTSYTSTTSYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTT 225
Query: 206 S 208
S
Sbjct: 226 S 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPA 217
TP+YTSTT TS S +T+ + +S + T T S TS P+
Sbjct: 194 TPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPTTSYTSTTSYTSNPS 244
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTST---TRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTT 205
S + TS TP+YTST T + T S T T + +S +S T T STT
Sbjct: 178 SYTSTTSYTPTPSYTSTPSYTSTTSYTCTTSYTSTTSYTCTTSYTSTTSYTPTTSYTSTT 237
Query: 206 S 208
S
Sbjct: 238 S 238
>SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 40 YDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYED 153
YD + K VH+DD E Y N+ Y+ +D Y+D
Sbjct: 636 YDDNEGSKMVKVHWDDYENYVNVNVNDDDYDDYDDYDD 673
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
TS T +YTSTT + TS PS T+T + +S SS T T STTS
Sbjct: 6 TSYTSTTSYTSTT---SYTSTPSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTS 55
Score = 32.7 bits (71), Expect = 0.32
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLG--MNPS-TNTRTKSSVSSMT* 181
TP S + TS T +YTSTT + TS S PS T+T + +S +S T
Sbjct: 23 TPSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTS 82
Query: 182 RTHMDSTTS--KPASNRCSIFLSDRVHQTLGLRYW*TVYRTMLPARRNRVSH 331
T STTS S C+ + T Y T T P+ + S+
Sbjct: 83 TTSYTSTTSYTSTTSYTCTTSYTSTTSYTSTTSYTPTTSYTPTPSYTSTPSY 134
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
S + TS TP+YTSTT + TS S +T+ + +S +S T T S TS
Sbjct: 13 SYTSTTSYTSTPSYTSTTSYTSTTSYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTS 70
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGM-NPSTNTRTKSSVSSMT*RT 187
T PN + T T+ TPT T+TT AT T+P + N +T T T ++ + T
Sbjct: 158 TTPNTTTTTPNTTTT---TPTATTTTPTATTTTPNTTTNTPNATTTTPTATTTTPNATTT 214
Query: 188 HMDSTTSKP 214
++TT+ P
Sbjct: 215 TPNTTTTTP 223
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TPT T+TT T T+ P P+T T T ++ ++ T T+ N
Sbjct: 116 TPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTSPNATTTTPNTTTTTPN 168
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 65 TPTYTSTTRNATITSP-PSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
TP T+T+ NAT T+P + N +T T T ++ + T ++TT+ P
Sbjct: 145 TPNTTTTSPNATTTTPNTTTTTPNTTTTTPTATTTTPTATTTTPNTTTNTP 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGM-NPSTNTRTKSSVSSMT*RTHMDSTTSKPAS 220
T T+ TP T+ T NAT T+P + N +T T ++ + T +TT + +
Sbjct: 180 TPTATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNTTTTTPNATTTTPTATTMQQSF 239
Query: 221 NRCS 232
NR S
Sbjct: 240 NRVS 243
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TP T+TT N T TS P+ P+T T T ++ ++ T T + N
Sbjct: 138 TPNTTTTTPNTTTTS-PNATTTTPNTTTTTPNTTTTTPTATTTTPTATTTTPN 189
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 32 RSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRT--KSSVSSMT*RTHMDSTT 205
R + T+ T T T T NAT T+P + +T T T ++ + T T ++TT
Sbjct: 91 RELIAATATITTYTATVTAPNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTT 150
Query: 206 SKP 214
+ P
Sbjct: 151 TSP 153
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 68 PTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPA 217
P T N T+TS P+ L NP+T T T + ++ +++ + TSKPA
Sbjct: 332 PATEGTKINTTVTSKPAWLTQNPNTTTTTTIAPAAEGTKSN-TTVTSKPA 380
>SB_17243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 31.9 bits (69), Expect = 0.55
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E +YD + +S++ LKI GK G + S V L E K + S+
Sbjct: 689 DILELGLYDAVCHFNLGYSSVLRLLEALKIPAGKYTEAGCGLEDTSRVRLAEYKSKEASK 748
Query: 492 TLRGTLR 512
T R LR
Sbjct: 749 TRRKVLR 755
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTN---TRTKSSVSSMT* 181
TP S + TS T +YTSTT + TS S P+T+ T + +S +S T
Sbjct: 5 TPSYTCTTSYTSTTSYTCTTSYTSTTSYTSTTSYTSTTSYTPTTSYTCTTSYTSTTSYTS 64
Query: 182 RTHMDSTTS 208
T STTS
Sbjct: 65 TTSYTSTTS 73
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITS--PPSRLGMNPS-TNTRTKSSVSSMT*RTHMDSTTS 208
TS T +YTSTT + TS P + S T+T + +S +S T T STTS
Sbjct: 24 TSYTSTTSYTSTTSYTSTTSYTPTTSYTCTTSYTSTTSYTSTTSYTSTTSYTSTTS 79
>SB_24194| Best HMM Match : RyR (HMM E-Value=5)
Length = 211
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 55 KLKNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISIINDLKNTYGFNNIEASK 219
++KN+ +F+++ R NNI + + D + + +K +GF N+E +
Sbjct: 97 RVKNSLEYFENQSRRNNIQVSGIEESEGETWYDAEVKVKEAIKTKFGFENVEIER 151
>SB_23245| Best HMM Match : ApoC-I (HMM E-Value=5.7)
Length = 206
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 55 KLKNAHVHFDDKERYNNIPTIKTGYESFDKYEDQIISIINDLKNTYGFNNIE 210
++KN+ +F+++ R NNI + + D + + +K +GF N+E
Sbjct: 97 RVKNSLEYFENQSRRNNIQVSGIEESEGETWYDAEVKVKEAIKTKFGFENVE 148
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 31.1 bits (67), Expect = 0.97
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +2
Query: 8 DTPPNIHIRSCMTL--TSN*K----TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVS 169
+TP + S M+L TSN K TPT STT ++ S PS + S+NT T S +
Sbjct: 135 NTPTALSTTSLMSLPSTSNLKASSNTPTALSTTSLMSLPSTPS---LEASSNTPTALSAT 191
Query: 170 SMT*RTHMDSTTSKPASNRCSIFLS 244
S+ + ST+S AS+ LS
Sbjct: 192 SL---MSLPSTSSLEASSNTPTALS 213
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
+L ++ TPT STT ++ S PS + S+NT T S +S+ + ST S AS+
Sbjct: 129 SLKASSNTPTALSTT---SLMSLPSTSNLKASSNTPTALSTTSL---MSLPSTPSLEASS 182
Query: 224 RCSIFLS 244
LS
Sbjct: 183 NTPTALS 189
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.1 bits (67), Expect = 0.97
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +2
Query: 26 HIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTT 205
H S TS TP+YT TT + TS PS T T + + +S T T STT
Sbjct: 16 HTTSYTHTTSYTSTPSYTCTT---SYTSTPSYTSTTSYTPTPSYTCTTSYTSTTSYTSTT 72
Query: 206 S 208
S
Sbjct: 73 S 73
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
S + TS TP+YT TT + TS S P+T+ +S + T T S T P
Sbjct: 43 SYTSTTSYTPTPSYTCTTSYTSTTSYTSTTSYTPTTSYTPTTSYTPTTSYTPTPSYTPTP 102
Query: 215 A 217
+
Sbjct: 103 S 103
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
TS TP+YTSTT + T PS T+T + +S +S T T TTS
Sbjct: 36 TSYTSTPSYTSTT---SYTPTPSYTCTTSYTSTTSYTSTTSYTPTTSYTPTTS 85
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 77 TSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
TSTT N+T +P + ST T S+ S+ T RT +TTS P+++
Sbjct: 55 TSTTSNSTTRAPSTSTPRAGSTT--TTSAPSTSTPRTGSTTTTSAPSTS 101
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
S T TS T +YTSTT + TS S T+T + +S +S T T STTS
Sbjct: 79 SYTTTTSYTPTTSYTSTT---SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTS 133
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITS--PPSRLGMNPS-TNTRTKSSVSSMT*RTHMDSTTS 208
TS T +YTSTT T TS P + S T+T + +S +S T T STTS
Sbjct: 66 TSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTS 121
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
TS T +YTSTT + TS S T+T + +S +S T T STTS
Sbjct: 90 TSYTSTTSYTSTT---SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTS 139
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
T +YT+TT + TS + P+T+ + +S +S T T S TS
Sbjct: 65 TTSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTS 112
>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 236 RSNNDCLLASMLLNPYVFFKSLMILMIWSSYLSKDSYPVLMV 111
RSNN L+ L P + ++ M W LSKD PVL+V
Sbjct: 820 RSNNAKLVVISLPVPVAEMTTPLMYMSWLEMLSKDLPPVLLV 861
>SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E ++YD + +S++ LKI GK G + S V L E K + S+
Sbjct: 506 DILELSLYDAVCHFNMGYSSVLRLLEALKIPAGKYTEAGCGLEDTSRVWLAEYKSKEASK 565
Query: 492 TLRGTLR 512
R LR
Sbjct: 566 RRRKVLR 572
>SB_45896| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 104
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E +YD + +S++ LKI GK G + S V L E K + S+
Sbjct: 15 DILELGLYDAVCHFNMGYSSVLRLLEALKIPAGKYTEAGCGLEDTSRVRLAEYKSKEASK 74
Query: 492 TLRGTLR 512
R LR
Sbjct: 75 RRRKVLR 81
>SB_27235| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 158
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E +YD + +S++ LKI GK G + S V L E K + S+
Sbjct: 69 DILELGLYDAVCHFNMGYSSVLRLLEALKIPAGKYTEAGCGLEDTSRVRLAEYKSKEASK 128
Query: 492 TLRGTLR 512
R LR
Sbjct: 129 RRRKVLR 135
>SB_21999| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 104
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E +YD + +S++ LKI GK G + S V L E K + S+
Sbjct: 15 DILELGLYDAVCHFNMGYSSVLRLLEALKIPAGKYTEAGCGLEDTSRVRLAEYKSKEASK 74
Query: 492 TLRGTLR 512
R LR
Sbjct: 75 RRRKVLR 81
>SB_31678| Best HMM Match : ApoC-I (HMM E-Value=4)
Length = 298
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E +YD + +S++ LKI GK G + S V L E K + S+
Sbjct: 209 DILELGLYDAVCHFNMGYSSVLRLLEALKIPAGKYTEAGCGLEDTSRVRLAEYKSKEASK 268
Query: 492 TLRGTLR 512
R LR
Sbjct: 269 RRRKVLR 275
>SB_7314| Best HMM Match : ApoC-I (HMM E-Value=3.6)
Length = 281
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E +YD + +S++ LKI GK G + S V L E K + S+
Sbjct: 104 DILELGLYDAVCHFNMGYSSVLRLLEALKIPAGKYTEAGCGLEDTSRVQLAEYKSKEASK 163
Query: 492 TLRGTLR 512
R LR
Sbjct: 164 RRRKVLR 170
>SB_56948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.1 bits (62), Expect = 3.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 290 YRTMLPARRNRVSHLRC 340
Y+TM+ +RNR+SH+ C
Sbjct: 141 YKTMISGQRNRISHIAC 157
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLG-MNPSTNTRTKSSVSSMT*RTHMDSTTSK 211
S M TS TP +S T N+T ++ + +P T T SSM STTS
Sbjct: 487 SSMATTSTTSTPLESSMTTNSTTSTLAEAVATSSPVLPTTTSVLTSSMESSMATTSTTST 546
Query: 212 PA 217
P+
Sbjct: 547 PS 548
>SB_44773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 312 DAIESAIYDVIFKNMAVTTSLITATPDLKIGGGKNLNQVVGFSEHSVVLLGEKKQTKDSE 491
D +E +YD + +S++ LKI GK G S V L E K + S+
Sbjct: 15 DILELGLYDAVCHFNMGYSSVLRLLEALKIPAGKYTEAGCGLDNTSRVRLAEYKSKEASK 74
Query: 492 TLRGTLR 512
R LR
Sbjct: 75 RRRKVLR 81
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 24.2 bits (50), Expect(2) = 5.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 205 IEASKQSLFDLPVRPGASNTWSSLLVNRVSDDASCSTQSSQPFTM*SS 348
IE S + L RP S+ SLL R+ C T+ + F++ S+
Sbjct: 862 IERSHLFVLQLVHRPSVSSVLQSLLRKRLLPAEHCITKVKRNFSLCST 909
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 49 DLKLKNAHVHFDDKERYNNIP 111
DL+L+ H +DK+ Y N P
Sbjct: 828 DLELQFKCYHHEDKQMYTNWP 848
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 80 STTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPA 217
S R+ +SPPS+ +P+T++ K +S++ + + T++PA
Sbjct: 432 SPKRSPRTSSPPSKSPFSPTTDSDKKHPLSAIKPKGKIADATAQPA 477
>SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65)
Length = 1799
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 112 TIKTGYESFDKYEDQIISIINDLKNTYG--FNNIEASKQSLFDLPVRPGASNTWSSLLVN 285
T TG+ S + + +N +N +G +N+ EAS ++P R + +++ + L +
Sbjct: 840 TPDTGFVSSRRSDTSTGIHLNRQQNAFGSVYNSSEASSAGRNEMPARSSSLSSFETPLTS 899
Query: 286 RVSDDASCSTQSSQPFTM*SSRT 354
V S SS+ SS T
Sbjct: 900 YVPTTVSAQNSSSRGRESFSSNT 922
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 62 KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTT 205
+TP STT +T +PP + +T T ++ S+T +T + +TT
Sbjct: 681 QTPPIASTTDTSTSQTPPIATTPSLTTQTTLIATTPSLTTQTTLIATT 728
>SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 82 DDKERYNNIPTIKTGYESFDKYE--DQIISIINDLKNTYGFNNIEASKQSLFDLPVRPGA 255
DDK Y+N P+ TG + + Y+ D +I + ++ + + KQ L L
Sbjct: 155 DDKPLYHNQPSTSTGEQGYFAYKIFDTVIKLTDNKRVQSTDPSQMQFKQLLLRLRKSEST 214
Query: 256 SNTWSSLLVNRVS 294
W+ LL + S
Sbjct: 215 MEDWNVLLTRQPS 227
>SB_7751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Frame = -3
Query: 633 WRPVWMKLLLLWP----HSTSRKLVDEKT*PPVPST 538
WRP W +L+ L P TS++++++K +PST
Sbjct: 97 WRPWWSELIPLRPQMDGQMTSKRVINKKVRDEMPST 132
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,610,947
Number of Sequences: 59808
Number of extensions: 501111
Number of successful extensions: 1880
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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