Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0582
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 39 0.004
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 33 0.16
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z27080-3|CAA81604.3| 379|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 1.1
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 31 1.1
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 31 1.1
U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 30 1.5
U23521-10|AAC46808.1| 129|Caenorhabditis elegans Hypothetical p... 30 1.5
AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical ... 30 1.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 30 2.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 2.0
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 29 2.6
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53344-7|AAM15599.1| 183|Caenorhabditis elegans Hypothetical pr... 29 4.5
U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 6.0
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 6.0
U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of... 28 6.0
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 28 6.0
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 6.0
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 6.0
L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein. 28 6.0
AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 28 6.0
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 28 7.9
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 65 TPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
TPT TSTT T T+P + P+T T T S+ ++ T T +TT+
Sbjct: 64 TPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTT 111
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTH 190
T P I I + + S ++ T STTR +T SP + L +P T T SS S T +T
Sbjct: 139 TTPEI-ITGIVVINSKSESVTDMSTTRFSTTLSPTTELLTSPETLVSTDSSTS--TEQTS 195
Query: 191 MDSTT 205
D+TT
Sbjct: 196 PDNTT 200
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 41 MTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPAS 220
++ T+ T T STT+ +T +P + P+T ++ + + T +++T KP +
Sbjct: 248 VSTTTEEPTTTAESTTKKSTTKAPATTEEPTPTTTEEVTTTEAETSTTTSSETSTEKPTT 307
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 50 TSN*KTPTYTSTTRNATITSP---PSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPAS 220
T+ TPT T+TT T T+P P+ P+T T T+S+ + T T +TT+ P +
Sbjct: 263 TTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTT-TESTTTETTSTTTPTTTTTAPTT 321
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
+C + T+ T T T TT+ T T+ P+ P+T T T ++ + T T +TT
Sbjct: 244 TCASTTTVSTTSTVT-TTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTEST 302
Query: 215 ASNRCS 232
+ S
Sbjct: 303 TTETTS 308
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTH 190
TP T T + T T ++TT T T+P + + +T T + ++ T
Sbjct: 286 TPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPT 345
Query: 191 MDSTTSKPAS 220
+TT+KP +
Sbjct: 346 TTATTTKPTT 355
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGM-NPSTNTRTKSSVSSMT*RT 187
TP + T T+ TPT T+TT T T+P + +T T T ++ + T T
Sbjct: 142 TPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTT 201
Query: 188 HMDSTTSKPAS 220
+TT+ P +
Sbjct: 202 TPTTTTTTPTT 212
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTH 190
T P + T T+ T T T TT T T+P + P+T T T ++ + T T
Sbjct: 79 TTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTE 138
Query: 191 MDST 202
+T
Sbjct: 139 TTTT 142
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSR--LGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPA 217
T T+ T T T+T T T+P + P+T T T + S T T TTS P
Sbjct: 254 TTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPT 313
Query: 218 S 220
+
Sbjct: 314 T 314
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDST 202
T T+ TPT T+TT T T+P + P+T T T ++ ++ T T +T
Sbjct: 73 TTTTTPTTPTTTTTTPTTTTTTPTTTT-TTPTTTTETTTTPTTETTTTPTTTT 124
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSP--PSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
T T+ TPT T+TT T T+P + P+T T T + ++ T T +TT+
Sbjct: 80 TPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTT 136
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
T T+ TPT T+TT T T+P + +T T ++ ++ T T + +TT+
Sbjct: 167 TPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
T T+ TPT T+TT T T+P + P+T T T ++ +++ T TT+
Sbjct: 174 TPTTTTTTPTTTTTTPTTTTTAPTTTT-TTPTTTTTTPTTTTTVPTTTTTTPTTT 227
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPAS 220
T T+ PT T+TT T T+P + + P+T T T ++ ++ T T +TT+ P +
Sbjct: 188 TPTTTTTAPTTTTTTPTTTTTTPTTTTTV-PTTTTTTPTTTTTTT--TTPTTTTTTPTT 243
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
T T+ TPT T+TT T T+P + +T T ++ ++ T T +TT+
Sbjct: 160 TPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSS--MT*RTHMDSTTSKPA 217
T T+ TPT T+T T T+ + P+T T T ++ ++ T T +TT+ P
Sbjct: 124 TPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPT 183
Query: 218 S 220
+
Sbjct: 184 T 184
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
T T+ TPT T+T T T+P + + T T + ++ T T TT+
Sbjct: 202 TPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTT 256
>Z27080-3|CAA81604.3| 379|Caenorhabditis elegans Hypothetical
protein F55H2.7 protein.
Length = 379
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 71 TYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRC 229
T ++TT N+TI PS N + RT + R D T+S+P RC
Sbjct: 131 TTSATTSNSTIRGKPSFGRENSAKIERTTPRLVPRMPRVSSDQTSSRPKEERC 183
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.85
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +2
Query: 17 PNIHIRSCMTLTSN*KTPTYTSTTRNATITSP------PSRLGMNPSTNTRTKSSVSSMT 178
P+ + T T+ TPT T+TT T T+P P+ P+T T T+S+ +
Sbjct: 85 PSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTRSTPLTEV 144
Query: 179 *RTHMDSTTSKP 214
RT +TT P
Sbjct: 145 FRT--STTTEAP 154
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 68 PTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCSIFLS 244
PT T+TT++ + + ++ P+T+ T +S ++ T +TT KPA+ R S +S
Sbjct: 406 PT-TTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTST-TIPPSTTTRKPANPRRSTIMS 462
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSS--VSSMT*RTHMDSTTSKPA 217
T T++ T T T T + T+TS + ST T+T +S S T TH+ + S A
Sbjct: 528 TATTSSSTTTVT-TQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTHVGAPASSVA 586
Query: 218 S 220
S
Sbjct: 587 S 587
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +2
Query: 29 IRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
IR T T K T TST + T T+ + P+T T V + T +T TTS
Sbjct: 373 IRQVTTTTK--KPSTTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTS 430
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPP-SRLGMNPSTN------TRTKSSVSSMT*RTHMDST 202
T+T+ T T T++T + + T P S + +PST+ T + SS +++T T +ST
Sbjct: 422 TVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTEST 481
Query: 203 TSKPAS 220
++ P+S
Sbjct: 482 STSPSS 487
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
T+TS T T T T +T+T+ S PST+T +S+ ++ T T ST+S +
Sbjct: 285 TVTST-VTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFT-STASTSTSSTSTTQ 342
Query: 224 RCS 232
+ S
Sbjct: 343 QSS 345
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTN-----TRTKSSVSSMT*RTHMDSTTS 208
T TS T T TSTT +T T+ PS PS+ + T SS S T T STT+
Sbjct: 481 TSTSPSSTVT-TSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSST-STQQSSTTT 538
Query: 209 KPASNRCS 232
K + S
Sbjct: 539 KSETTTSS 546
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPP-SRLGMNPSTN------TRTKSSVSSMT*RTHMDST 202
T+T+ T T T++T + + T P S + +PST+ T + SS +++T T +ST
Sbjct: 422 TVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTEST 481
Query: 203 TSKPAS 220
++ P+S
Sbjct: 482 STSPSS 487
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASN 223
T+TS T T T T +T+T+ S PST+T +S+ ++ T T ST+S +
Sbjct: 285 TVTST-VTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFT-STASTSTSSTSTTQ 342
Query: 224 RCS 232
+ S
Sbjct: 343 QSS 345
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTN-----TRTKSSVSSMT*RTHMDSTTS 208
T TS T T TSTT +T T+ PS PS+ + T SS S T T STT+
Sbjct: 481 TSTSPSSTVT-TSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSST-STQQSSTTT 538
Query: 209 KPASNRCS 232
K + S
Sbjct: 539 KSETTTSS 546
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 8 DTPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLG-MNPSTNTRTKSSVSSMT 178
DTP H + +++ T T TST+R+ + +P +R +T+T T SS ++ T
Sbjct: 88 DTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSKATTT 145
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRT--KSSVSSMT*RTHMDSTTSKPA 217
T T+ TP T+TT T T+P P+T T T ++ S+ + T + +TT+ P
Sbjct: 421 TTTTTTTTPKPTTTT--TTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
Query: 218 SNRCSIFLSD 247
+C+ F+ D
Sbjct: 479 -KKCTDFVED 487
>U42848-2|AAA83608.2| 315|Caenorhabditis elegans Hypothetical
protein C31H1.5 protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 14 PPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT 178
P +H + T TS T T STT+N T+T P N ST T ++++ T
Sbjct: 242 PFYLHYKEDTTTTSTTDTTTTISTTKNTTVTQKPKTNTTN-STVTIEETTLEEKT 295
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 29 IRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTS 208
I S + T++ T T TT T T+ P+ P+T T +++ S T STT+
Sbjct: 273 IPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTT 332
Query: 209 KPASNRCSI 235
+++ +I
Sbjct: 333 TTSASTTTI 341
>U23521-10|AAC46808.1| 129|Caenorhabditis elegans Hypothetical
protein F41C3.1 protein.
Length = 129
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/53 (20%), Positives = 31/53 (58%)
Frame = +3
Query: 111 HHQDWV*ILRQIRGPNHQYHQ*LEEHIWIQQHRSQQAIVVRSSCQTGCIKHLV 269
H D++ +R+ PN + + +E+H+W ++ S + ++++ ++ C++ V
Sbjct: 69 HFDDFIKDMRE--NPNPAFTELVEDHVWRRERTSVMSSLLKTYAKSQCVRSFV 119
>AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical
protein C35A11.3 protein.
Length = 332
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 32 RSCMTLTSN*KTPTYTSTTRNATITSPPSRL--GMNPSTNTRTKSSVSSMT*RTHMDSTT 205
R T T+ T TSTT AT ++P + + +PST T T +S ++ T H+ STT
Sbjct: 35 RETSTTTATESTTVSTSTT--ATSSTPTTEIFSSNSPSTETTTCASPTTST-NGHLTSTT 91
Query: 206 SKPASN 223
A++
Sbjct: 92 DGAATS 97
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVS 169
T P + + T T+ T T T+TT T T+P + + PST T T V+
Sbjct: 674 TAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVT 726
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVS 169
T P + + T T+ T T T+TT T T+P + + PST T T V+
Sbjct: 730 TAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVT 782
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVS 169
T P + + T T+ T T T+TT T T+P + + PST T T V+
Sbjct: 553 TAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVT 605
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 62 KTPTYT--STTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCSI 235
KTP+++ STT + +S S G T T + S+ +++ + T PASN SI
Sbjct: 1051 KTPSFSFNSTTTPKSTSSTSSIFGGGLKTQTPSSSNSTNIFGARTTTTATPTPASNTSSI 1110
Query: 236 F 238
F
Sbjct: 1111 F 1111
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
S MT++S+ TP +ST N+ + P ++ T+T S+MT DSTT+ P
Sbjct: 531 STMTVSSDSTTPGPSSTATNSASSETPC------NSETQTSDGTSTMT--VPNDSTTAGP 582
Query: 215 AS 220
+S
Sbjct: 583 SS 584
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
S MT++S+ TP +ST N+ + P N+ T++S + T DSTT+ P
Sbjct: 455 STMTVSSDSTTPGPSSTATNSASSETPC--------NSETQTSDGTFTMTVSSDSTTAGP 506
Query: 215 AS 220
+S
Sbjct: 507 SS 508
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 71 TYTSTTRNATITSPPSRLGMNPST-----NTRTKSSVSSMT*RTHMDSTTSKPAS 220
T+T T N + T+ PS N ++ N+ T++S + T DSTT+ P+S
Sbjct: 834 TFTMTVPNDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVPNDSTTAGPSS 888
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 71 TYTSTTRNATITSPPSRLGMNPST-----NTRTKSSVSSMT*RTHMDSTTSKPAS 220
T+T T N + T+ PS N ++ N+ T++S + T DSTT+ P+S
Sbjct: 758 TFTMTVPNDSTTAGPSSTVTNSASSETPCNSETQTSDGTSTMTVSNDSTTAGPSS 812
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +2
Query: 35 SCMTLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKP 214
S MT++S+ T +ST N+ + P ++ T+T S+MT DSTT+ P
Sbjct: 1321 STMTVSSDSTTAGQSSTATNSASSETPC------NSETQTSDGTSTMT--VSSDSTTAGP 1372
Query: 215 AS 220
+S
Sbjct: 1373 SS 1374
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 11 TPPNIHIRSCMTLTSN*KTPTYTSTTRNATITS--PPSRLGMNPSTNTRTKSSVSSMT*R 184
TP + T ++ PT +S+T T T+ P + P+T T T S+ +S T
Sbjct: 441 TPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTT-- 498
Query: 185 THMDSTTSKP 214
T + TTS P
Sbjct: 499 TTLPPTTSTP 508
>Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical
protein D2005.2 protein.
Length = 172
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 1 LVGHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYEDQ 156
L+G T+ YPY I + + + +R++N G + FD+Y+D+
Sbjct: 20 LIGFTAAYPYLIFPASPSSGDSRRLVKRAFDRFDNSGVFSFGAKRFDRYDDE 71
>U53344-7|AAM15599.1| 183|Caenorhabditis elegans Hypothetical
protein T07H6.1b protein.
Length = 183
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 7 GHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYED 153
G++S+Y + D LKL +HF D + +N + T Y S D D
Sbjct: 73 GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 118
>U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical
protein T07H6.1a protein.
Length = 702
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 7 GHTSKYPYPILYDTDLKLKNAHVHFDDKERYNNIPTIKTGYESFDKYED 153
G++S+Y + D LKL +HF D + +N + T Y S D D
Sbjct: 592 GNSSQY---VSLDVPLKLLEGEIHFPDAQFWNTEAELITRYVSKDSETD 637
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSS--VSSMT*RTHMDSTTSKPA 217
T T++ T T T T + T+TS + ST T+T +S S T TH+ + S A
Sbjct: 369 TATTSSSTTTVT-TQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTHVGAPASSVA 427
Query: 218 S 220
S
Sbjct: 428 S 428
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 44 TLTSN*KTPTYTSTTRNATITSPPSRLGMNPSTNTRTKSS--VSSMT*RTHMDSTTSKPA 217
T T++ T T T T + T+TS + ST T+T +S S T TH+ + S A
Sbjct: 409 TATTSSSTTTVT-TQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQTTTTHVGAPASSVA 467
Query: 218 S 220
S
Sbjct: 468 S 468
>U67951-5|AAB07574.2| 778|Caenorhabditis elegans Degeneration of
certain neuronsprotein 1 protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 20 NIHIRSCMTLTSN*KTPTYTSTTRNATITSPPS 118
N+ S T T+ PT TSTT T T PP+
Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 TPTYTSTT-RNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCSIFL 241
TP ++S+T RN+++ P R S+++ +S + DST + + S+
Sbjct: 105 TPVHSSSTSRNSSVAPTPQRTVSTSSSSSSAATSARVSEDESDSDSTPGEVQRRKTSVLS 164
Query: 242 SDR 250
+D+
Sbjct: 165 NDK 167
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 TPTYTSTT-RNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCSIFL 241
TP ++S+T RN+++ P R S+++ +S + DST + + S+
Sbjct: 876 TPVHSSSTSRNSSVAPTPQRTVSTSSSSSSAATSARVSEDESDSDSTPGEVQRRKTSVLS 935
Query: 242 SDR 250
+D+
Sbjct: 936 NDK 938
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 65 TPTYTSTT-RNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPASNRCSIFL 241
TP ++S+T RN+++ P R S+++ +S + DST + + S+
Sbjct: 873 TPVHSSSTSRNSSVAPTPQRTVSTSSSSSSAATSARVSEDESDSDSTPGEVQRRKTSVLS 932
Query: 242 SDR 250
+D+
Sbjct: 933 NDK 935
>L34414-1|AAA99524.1| 778|Caenorhabditis elegans degenerin protein.
Length = 778
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 20 NIHIRSCMTLTSN*KTPTYTSTTRNATITSPPS 118
N+ S T T+ PT TSTT T T PP+
Sbjct: 342 NMTTTSTTTTTTTTPPPTTTSTTTTTTTTPPPT 374
>AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 465 EKKQTKDSETLRGTLRRQTIHA*TLLKAPVATFSRRPTFEKLNAATAK 608
EK++TKD+E RQT A +AP A P+ K +A K
Sbjct: 165 EKQETKDAEPKEQVDDRQTEEAVHARRAPAAAEEPAPSTSKADAVEEK 212
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 74 YTSTTRNATITSPPSRLGMNPSTNTRTKSSVSSMT*RTHMDSTTSKPA 217
Y + + IT+P + M PS N + S MT + ++S T K A
Sbjct: 526 YRNNSGPIPITNPYLSMTMKPSINGNRRLPYSGMTIKKELESITMKKA 573
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,263,725
Number of Sequences: 27780
Number of extensions: 366746
Number of successful extensions: 1439
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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