Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0581
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.44 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   1.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 180 RSRQHQPCSSISDRSCTSTTWNSSNVYWSWPDPAAPPNWQLLGHISNIKP 329
           + R   P + + + S    +  + NV+  W  P   PN+  + H  NI P
Sbjct: 265 KCRPDPPQNLVINESIIDLSQQTYNVHLMWSKPDLIPNY-YIAHFINIDP 313


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +3

Query: 354 LKKLHELTNENK--FMGTFGQQQICHNAQ 434
           +KK  E+T ++    MG   QQQI HN Q
Sbjct: 215 VKKREEVTQKDSPMNMGHLTQQQIIHNTQ 243


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 102 KNVSHFI*CYLNDYLLFNVSGTICI 28
           KN+S FI   LN+Y  F+ +G   I
Sbjct: 297 KNISEFINVVLNNYPDFSAAGFFSI 321


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 423 DISAAVQMCP*ICFHLLAHVVFLNLIS 343
           +I+A+  + P   +H+  H+V   LIS
Sbjct: 46  NITASAVLLPFAIYHIFMHIVPTKLIS 72


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 210 YCYMVDAVCFCDCGQESSLS 151
           YC  +  V FCDC  ++SL+
Sbjct: 291 YCLFLLFV-FCDCSHQASLN 309


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 210 YCYMVDAVCFCDCGQESSLS 151
           YC  +  V FCDC  ++SL+
Sbjct: 291 YCLFLLFV-FCDCSHQASLN 309


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 210 YCYMVDAVCFCDCGQESSLS 151
           YC  +  V FCDC  ++SL+
Sbjct: 291 YCLFLLFV-FCDCSHQASLN 309


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/22 (27%), Positives = 16/22 (72%)
 Frame = +1

Query: 598 LVFHTSRWNTLHTWYQNFERRL 663
           L+F+  +W++L+  +Q  +++L
Sbjct: 39  LIFNQEQWSSLNKNFQFIDKKL 60


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 238 PGTAAMSTGAGLTQPHLLTGSYLVTFRTSSHRPYLRYQI*KNYMS 372
           PG      GAGL +PH+     L     S H  +  +    N+++
Sbjct: 14  PGYMDGGAGAGLYEPHVAHRPGLQGLHHSPHLNHAMHPYHANHVN 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,268
Number of Sequences: 336
Number of extensions: 3569
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)