Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0581
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0599 - 30251708-30251815,30251864-30251984,30252068-302522...    31   1.1  
10_08_0685 - 19875801-19875980,19876074-19876277,19876392-198767...    29   3.4  
03_02_0465 - 8688454-8689899                                           29   3.4  
12_01_0676 + 5765154-5765241,5765329-5765453,5765533-5765604,576...    29   4.5  
03_04_0138 - 17624099-17624141,17624619-17625166                       28   6.0  
12_02_1149 - 26467252-26468319,26468452-26469147,26469263-264694...    28   7.9  
02_05_1180 + 34776151-34776480,34776578-34776760,34776849-347771...    28   7.9  

>02_05_0599 -
           30251708-30251815,30251864-30251984,30252068-30252215,
           30252303-30252480,30252587-30252625,30252704-30252799,
           30252879-30253030,30253336-30253722,30253836-30253940,
           30254083-30254098
          Length = 449

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
 Frame = +3

Query: 165 PDHNHRSRQHQPCSSISDRSCTSTTWNSSNVYWSWPDPAAPP-NWQLLG--HISNIKPSA 335
           P+ NH   +  P + +  RSC   T N+S V      P+    N +  G  HIS  +P A
Sbjct: 240 PERNHEDSKSMPWAKVYYRSCWRNTKNTSQVQGEDLSPSTQDMNNEQYGPKHISAAQP-A 298

Query: 336 IFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
           +F   N + +   T  +  M T   Q +  N+
Sbjct: 299 LF---NTQSVTSTTTSSSHMATGTPQNLEKNS 327


>10_08_0685 -
           19875801-19875980,19876074-19876277,19876392-19876724,
           19876834-19877115,19877210-19877425,19879752-19880024
          Length = 495

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 408 QQQICHNAQIGISIEPEANVQLLASSVALQETNNM*HL 521
           Q++ICH A +  S    A+V     S+  Q  NNM +L
Sbjct: 315 QEKICHEAMVATSAGDTASVDEFLQSLTDQALNNMHYL 352


>03_02_0465 - 8688454-8689899
          Length = 481

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 211 FLTGAVPLPPGTAAMSTGAGLTQPHLLTGSYLVTFRTSSHR 333
           F T   P   G+  ++ GAGL   +     +L TFRT  HR
Sbjct: 113 FPTALAPRHDGSLCLAHGAGLLTHYSPALEHLTTFRTHLHR 153


>12_01_0676 +
           5765154-5765241,5765329-5765453,5765533-5765604,
           5765728-5765802,5765880-5765905,5766709-5766870,
           5766963-5767037,5767133-5767204,5767289-5767363,
           5767461-5767529,5767839-5767910,5768030-5768161,
           5768430-5768920,5769315-5769476,5769570-5769709,
           5769818-5770037,5770398-5770633,5771560-5772051
          Length = 927

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 303 LGHISNIKPSAIFKISNLKKLHELTNENKFMGT 401
           +  +S   PS IF  SN+K +H L + NKF G+
Sbjct: 187 INQLSGSIPSQIFN-SNMKLIHLLLDNNKFSGS 218


>03_04_0138 - 17624099-17624141,17624619-17625166
          Length = 196

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 240 WNSSNVYWSWPDPAAP 287
           W SS  +W W +PAAP
Sbjct: 103 WGSSIPWWEWDNPAAP 118


>12_02_1149 -
           26467252-26468319,26468452-26469147,26469263-26469409,
           26470936-26471274
          Length = 749

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 527 KMLENLVNFVASFSVTQDSDDTHTWCFIHPAGTPFTRGTRTLRE 658
           K+L +LV+   S    +D D +   C++H  G  +   T +L E
Sbjct: 216 KILTDLVSTRRSKKTNRDDDGSEDKCYVHSDGAEYPSDTDSLDE 259


>02_05_1180 +
           34776151-34776480,34776578-34776760,34776849-34777198,
           34777430-34777631
          Length = 354

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 190 SINHVAVFLTGAVPLPPGTAA 252
           SINHV  +LTGA P  P   A
Sbjct: 215 SINHVVRYLTGAAPTYPNAVA 235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,964,336
Number of Sequences: 37544
Number of extensions: 367206
Number of successful extensions: 1100
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)