BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0581
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC021621-1|AAH21621.1| 197|Homo sapiens chromosome 11 open read... 58 3e-08
BC018080-1|AAH18080.1| 197|Homo sapiens chromosome 11 open read... 58 3e-08
BC015991-1|AAH15991.1| 197|Homo sapiens chromosome 11 open read... 58 3e-08
BC006476-1|AAH06476.1| 197|Homo sapiens chromosome 11 open read... 58 3e-08
BC001677-1|AAH01677.1| 197|Homo sapiens chromosome 11 open read... 58 3e-08
AK001447-1|BAA91698.1| 197|Homo sapiens protein ( Homo sapiens ... 58 3e-08
AK223198-1|BAD96918.1| 197|Homo sapiens hypothetical protein HS... 56 2e-07
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 0.95
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 33 1.3
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 32 2.2
>BC021621-1|AAH21621.1| 197|Homo sapiens chromosome 11 open reading
frame 73 protein.
Length = 197
Score = 58.0 bits (134), Expect = 3e-08
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +3
Query: 252 NVYWSWPDPAAPPNWQLLGHISNIKPSAIFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
+VY+S+PD P WQLLG ++N KPSAIFKIS LK +++ F G + A
Sbjct: 53 SVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGE--GSQHPF-GAMNIVRTPSVA 109
Query: 432 QIGISIE--PEANVQLLASSVALQETNNM*HLLRKC*KT*SIL*HHSLLRKIQMTPTPGV 605
QIGIS+E Q + A+ ++ +K + + QMTP+P
Sbjct: 110 QIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSE 169
Query: 606 SYIP 617
+IP
Sbjct: 170 MFIP 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 97 VFGLIVSGRLVHTDFSPIAETRFLTTITEADSINHVAVFLTGAVPLPPG 243
+FG +V+GRLV T +AE +F+ + + +SINHV VF+ G +P P G
Sbjct: 1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFPEG 49
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 622 NTLHTWYQNFERRLQQNPNF 681
N + WY+NF+RRL QNP F
Sbjct: 175 NVVLKWYENFQRRLAQNPLF 194
>BC018080-1|AAH18080.1| 197|Homo sapiens chromosome 11 open reading
frame 73 protein.
Length = 197
Score = 58.0 bits (134), Expect = 3e-08
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +3
Query: 252 NVYWSWPDPAAPPNWQLLGHISNIKPSAIFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
+VY+S+PD P WQLLG ++N KPSAIFKIS LK +++ F G + A
Sbjct: 53 SVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGE--GSQHPF-GAMNIVRTPSVA 109
Query: 432 QIGISIE--PEANVQLLASSVALQETNNM*HLLRKC*KT*SIL*HHSLLRKIQMTPTPGV 605
QIGIS+E Q + A+ ++ +K + + QMTP+P
Sbjct: 110 QIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSE 169
Query: 606 SYIP 617
+IP
Sbjct: 170 MFIP 173
Score = 50.4 bits (115), Expect = 6e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 97 VFGLIVSGRLVHTDFSPIAETRFLTTITEADSINHVAVFLTGAVPLPPG 243
+FG +V+GRLV T +AE +F+ + + +SINHV VF+ G +P G
Sbjct: 1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFAEG 49
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 622 NTLHTWYQNFERRLQQNPNF 681
N + WY+NF+RRL QNP F
Sbjct: 175 NVVLKWYENFQRRLAQNPLF 194
>BC015991-1|AAH15991.1| 197|Homo sapiens chromosome 11 open reading
frame 73 protein.
Length = 197
Score = 58.0 bits (134), Expect = 3e-08
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +3
Query: 252 NVYWSWPDPAAPPNWQLLGHISNIKPSAIFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
+VY+S+PD P WQLLG ++N KPSAIFKIS LK +++ F G + A
Sbjct: 53 SVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGE--GSQHPF-GAMNIVRTPSVA 109
Query: 432 QIGISIE--PEANVQLLASSVALQETNNM*HLLRKC*KT*SIL*HHSLLRKIQMTPTPGV 605
QIGIS+E Q + A+ ++ +K + + QMTP+P
Sbjct: 110 QIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSE 169
Query: 606 SYIP 617
+IP
Sbjct: 170 MFIP 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 97 VFGLIVSGRLVHTDFSPIAETRFLTTITEADSINHVAVFLTGAVPLPPG 243
+FG +V+GRLV T +AE +F+ + + +SINHV VF+ G +P P G
Sbjct: 1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFPEG 49
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 622 NTLHTWYQNFERRLQQNPNF 681
N + WY+NF+RRL QNP F
Sbjct: 175 NVVLKWYENFQRRLAQNPLF 194
>BC006476-1|AAH06476.1| 197|Homo sapiens chromosome 11 open reading
frame 73 protein.
Length = 197
Score = 58.0 bits (134), Expect = 3e-08
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +3
Query: 252 NVYWSWPDPAAPPNWQLLGHISNIKPSAIFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
+VY+S+PD P WQLLG ++N KPSAIFKIS LK +++ F G + A
Sbjct: 53 SVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGE--GSQHPF-GAMNIVRTPSVA 109
Query: 432 QIGISIE--PEANVQLLASSVALQETNNM*HLLRKC*KT*SIL*HHSLLRKIQMTPTPGV 605
QIGIS+E Q + A+ ++ +K + + QMTP+P
Sbjct: 110 QIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSE 169
Query: 606 SYIP 617
+IP
Sbjct: 170 MFIP 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 97 VFGLIVSGRLVHTDFSPIAETRFLTTITEADSINHVAVFLTGAVPLPPG 243
+FG +V+GRLV T +AE +F+ + + +SINHV VF+ G +P P G
Sbjct: 1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFPEG 49
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 622 NTLHTWYQNFERRLQQNPNF 681
N + WY+NF+RRL QNP F
Sbjct: 175 NVVLKWYENFQRRLAQNPLF 194
>BC001677-1|AAH01677.1| 197|Homo sapiens chromosome 11 open reading
frame 73 protein.
Length = 197
Score = 58.0 bits (134), Expect = 3e-08
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +3
Query: 252 NVYWSWPDPAAPPNWQLLGHISNIKPSAIFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
+VY+S+PD P WQLLG ++N KPSAIFKIS LK +++ F G + A
Sbjct: 53 SVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGE--GSQHPF-GAMNIVRTPSVA 109
Query: 432 QIGISIE--PEANVQLLASSVALQETNNM*HLLRKC*KT*SIL*HHSLLRKIQMTPTPGV 605
QIGIS+E Q + A+ ++ +K + + QMTP+P
Sbjct: 110 QIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSE 169
Query: 606 SYIP 617
+IP
Sbjct: 170 MFIP 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 97 VFGLIVSGRLVHTDFSPIAETRFLTTITEADSINHVAVFLTGAVPLPPG 243
+FG +V+GRLV T +AE +F+ + + +SINHV VF+ G +P P G
Sbjct: 1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFPEG 49
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 622 NTLHTWYQNFERRLQQNPNF 681
N + WY+NF+RRL QNP F
Sbjct: 175 NVVLKWYENFQRRLAQNPLF 194
>AK001447-1|BAA91698.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ10585 fis, clone NT2RP2003793. ).
Length = 197
Score = 58.0 bits (134), Expect = 3e-08
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +3
Query: 252 NVYWSWPDPAAPPNWQLLGHISNIKPSAIFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
+VY+S+PD P WQLLG ++N KPSAIFKIS LK +++ F G + A
Sbjct: 53 SVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSGE--GSQHPF-GAMNIVRTPSVA 109
Query: 432 QIGISIE--PEANVQLLASSVALQETNNM*HLLRKC*KT*SIL*HHSLLRKIQMTPTPGV 605
QIGIS+E Q + A+ ++ +K + + QMTP+P
Sbjct: 110 QIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSE 169
Query: 606 SYIP 617
+IP
Sbjct: 170 MFIP 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 97 VFGLIVSGRLVHTDFSPIAETRFLTTITEADSINHVAVFLTGAVPLPPG 243
+FG +V+GRLV T +AE +F+ + + +SINHV VF+ G +P P G
Sbjct: 1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFPEG 49
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 622 NTLHTWYQNFERRLQQNPNF 681
N + WY+NF+RRL QNP F
Sbjct: 175 NVVLKWYENFQRRLAQNPLF 194
>AK223198-1|BAD96918.1| 197|Homo sapiens hypothetical protein
HSPC138 variant protein.
Length = 197
Score = 55.6 bits (128), Expect = 2e-07
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +3
Query: 252 NVYWSWPDPAAPPNWQLLGHISNIKPSAIFKISNLKKLHELTNENKFMGTFGQQQICHNA 431
+VY+S+PD P WQLLG ++N KPSAI KIS LK +++ F G + A
Sbjct: 53 SVYFSYPDSNGMPVWQLLGFVTNGKPSAILKISGLKSGE--GSQHPF-GAMNIVRTPSVA 109
Query: 432 QIGISIE--PEANVQLLASSVALQETNNM*HLLRKC*KT*SIL*HHSLLRKIQMTPTPGV 605
QIGIS+E Q + A+ ++ +K + + QMTP+P
Sbjct: 110 QIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSE 169
Query: 606 SYIP 617
+IP
Sbjct: 170 MFIP 173
Score = 53.6 bits (123), Expect = 6e-07
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 97 VFGLIVSGRLVHTDFSPIAETRFLTTITEADSINHVAVFLTGAVPLPPG 243
+FG +V+GRLV T +AE +F+ + + +SINHV VF+ G +P P G
Sbjct: 1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFPEG 49
Score = 32.7 bits (71), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 622 NTLHTWYQNFERRLQQNPNF 681
N + WY+NF+RRL QNP F
Sbjct: 175 NVVLKWYENFQRRLAQNPLF 194
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.1 bits (72), Expect = 0.95
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -1
Query: 275 VRPAPVDIAAVPGGRGTAPVRNTATWLMLSASVIVVRNLVSAIGEKSVWTSRPDTINPKT 96
V PV + P GR T+P ++T++W + +V + S + TI T
Sbjct: 1035 VTSTPVTAPSTPSGRATSPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTSAPTTSTIPAST 1094
Query: 95 LVILSSVT*MTT 60
S+ T TT
Sbjct: 1095 PSTTSAPTTSTT 1106
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -1
Query: 275 VRPAPVDIAAVPGGRGTAPVRNTATWLMLSASVIVVRNLVSAIGEKSVWTSRPDTINPKT 96
V PV + P GR T+P ++T++W + +V + S + T + T
Sbjct: 304 VTSTPVTAPSTPSGRATSPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTSAPTTSTTSAPT 363
Query: 95 LVILSSVT*MTT 60
S+ T TT
Sbjct: 364 TSTTSAPTTSTT 375
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -1
Query: 275 VRPAPVDIAAVPGGRGTAPVRNTATWLMLSASVIVVRNLVSAIGEKSVWTSRPDTINPKT 96
V PV + P GR T+P ++T++W + +V + S + T + T
Sbjct: 128 VTSTPVTAPSTPSGRATSPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTSAPTTSTTSAPT 187
Query: 95 LVILSSVT*MTT 60
S+ T TT
Sbjct: 188 TSTTSAPTTSTT 199
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = -1
Query: 275 VRPAPVDIAAVPGGRGTAPVRNTATWLMLSASVIVVRNLVSAIGEKSVWTSRPDTINPKT 96
V PV + P GR +P ++T++W + +V + S + + T + T
Sbjct: 2222 VTSTPVTAPSTPSGRAISPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTYAHTTSTTSAPT 2281
Query: 95 LVILSSVT*MTT 60
S+ T TT
Sbjct: 2282 ARTTSAPTTSTT 2293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,715,337
Number of Sequences: 237096
Number of extensions: 2097225
Number of successful extensions: 6848
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6834
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -