Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0580
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       24   2.8  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   2.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.7  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   8.6  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/34 (23%), Positives = 21/34 (61%)
 Frame = +1

Query: 250 GLFLRVQWSRTTQKLKIKHN*YSSPSNQNPTLIM 351
           GL+ R  W+   Q+L+ + + + + +++ P ++M
Sbjct: 298 GLYYRGSWATPFQQLRTEESKFFTNTDERPVMMM 331


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 43  FEKVLELMQKMQDLGQPPTELVGDIGPVPQSFGPAAQDPS 162
           F K LELMQ+   LG           PV +S  P  + P+
Sbjct: 723 FRKALELMQRSIGLGGSGAGGPSSSPPVMESIPPPPKPPT 762


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 134 ASVQRHRIHHNVASTRRLTTRGWDDGLFKDVDLMIVKSLVYFCEYSGAV 280
           A +Q HR+  + A   R+  RGW    F + D    K L+ F ++  AV
Sbjct: 199 AIIQGHRLTSSSAHGSRVGGRGWKTESFNE-DFF--KELLAFGDFGEAV 244


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 275 LHCTRRNRPTT*QSSGPR 222
           L+C++  +P T  S GP+
Sbjct: 65  LYCSQNQKPNTGDSGGPK 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,150
Number of Sequences: 2352
Number of extensions: 11271
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)