Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0576
         (656 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00003C0253 Cluster: PREDICTED: similar to CG31855-PA...    91   3e-17
UniRef50_UPI00015B4EE1 Cluster: PREDICTED: similar to conserved ...    87   3e-16
UniRef50_Q7Q3W9 Cluster: ENSANGP00000011663; n=2; Culicidae|Rep:...    86   6e-16
UniRef50_Q9BW61 Cluster: Uncharacterized protein C19orf58; n=26;...    86   6e-16
UniRef50_UPI0000583C2F Cluster: PREDICTED: similar to conserved ...    83   4e-15
UniRef50_UPI0000EBE622 Cluster: PREDICTED: similar to Chromosome...    71   2e-11
UniRef50_Q8IP73 Cluster: CG31855-PA; n=3; Sophophora|Rep: CG3185...    68   2e-10
UniRef50_A7T1D4 Cluster: Predicted protein; n=1; Nematostella ve...    63   5e-09
UniRef50_O94398 Cluster: Mitochondrial ribosomal protein subunit...    37   0.37 
UniRef50_Q9FFS4 Cluster: Arabidopsis thaliana genomic DNA, chrom...    37   0.49 
UniRef50_Q10SE2 Cluster: Expressed protein; n=4; Oryza sativa|Re...    37   0.49 
UniRef50_Q97MX2 Cluster: (FS) similar to ABC transporter (Permea...    33   6.0  
UniRef50_A4XMZ8 Cluster: Transposase, IS204/IS1001/IS1096/IS1165...    33   6.0  
UniRef50_Q54YG4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_UPI00003C0253 Cluster: PREDICTED: similar to CG31855-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG31855-PA - Apis mellifera
          Length = 109

 Score = 90.6 bits (215), Expect = 3e-17
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
 Frame = +3

Query: 126 FTMSVIEFLKDLPSYDANNFTLFNTDHGIRNXL*K-AIYIFTH*DIPSEQIIVTQKTNIL 302
           + MSV EFLK LPS++ NNF  F+TD G R  + K ++Y+ T  D PSEQIIVT+KT IL
Sbjct: 5   YKMSVAEFLKGLPSHNENNFANFHTDSGNRTCVKKPSVYLPTK-DHPSEQIIVTEKTTIL 63

Query: 303 LRYLHQQWEKKNNNSPKKRDQTHIEQNGED---SQQRKRPCL 419
           LRYLHQ W+K  N++ +KRD   +  + ED   +   KRP L
Sbjct: 64  LRYLHQHWDK--NHADRKRDFLSVNGDSEDDAATVHSKRPRL 103


>UniRef50_UPI00015B4EE1 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 112

 Score = 87.4 bits (207), Expect = 3e-16
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
 Frame = +3

Query: 132 MSVIEFLKDLPSYDANNFTLFNTDHGIRNXL*K-AIYIFTH*DIPSEQIIVTQKTNILLR 308
           MSV EFL  LPS + NNF  F+TD+G R  + + ++Y+ T  D PSEQ+IVT+KT I+LR
Sbjct: 13  MSVAEFLSGLPSINENNFANFHTDNGNRTCVKRPSVYLPTK-DYPSEQVIVTEKTTIVLR 71

Query: 309 YLHQQWEKKNNNSPKKRDQTHIEQNGEDSQQRKRP 413
           YLHQ+W+KK   + +KR+   +  +  + Q+ KRP
Sbjct: 72  YLHQRWDKK--TTERKRELMSVNGDPPEEQRSKRP 104


>UniRef50_Q7Q3W9 Cluster: ENSANGP00000011663; n=2; Culicidae|Rep:
           ENSANGP00000011663 - Anopheles gambiae str. PEST
          Length = 68

 Score = 86.2 bits (204), Expect = 6e-16
 Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = +3

Query: 135 SVIEFLKDLPSYDANNFTLFNTDHGIRNXL*K-AIYIFTH*DIPSEQIIVTQKTNILLRY 311
           S+ EFLKDLP ++  NF+LFNT++G++    + ++YI T  DIPSEQ+IVT K NILLRY
Sbjct: 2   SITEFLKDLPCHNEENFSLFNTENGVKTSSKRPSVYIPTV-DIPSEQVIVTDKKNILLRY 60

Query: 312 LHQQWEKK 335
           LHQQW+KK
Sbjct: 61  LHQQWDKK 68


>UniRef50_Q9BW61 Cluster: Uncharacterized protein C19orf58; n=26;
           Euteleostomi|Rep: Uncharacterized protein C19orf58 -
           Homo sapiens (Human)
          Length = 102

 Score = 86.2 bits (204), Expect = 6e-16
 Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = +3

Query: 144 EFLKDLPSYDANNFTLFNTDHGIR-NXL*KAIYIFTH*DIPSEQIIVTQKTNILLRYLHQ 320
           +FLK LP Y+ +NF+ F+ D   + +    ++Y+ T  + PSEQIIVT+KTNILLRYLHQ
Sbjct: 3   DFLKGLPVYNKSNFSRFHADSVCKASNRRPSVYLPTR-EYPSEQIIVTEKTNILLRYLHQ 61

Query: 321 QWEKKNNNSPKKRDQTHIEQNGEDS 395
           QW+KK  N+ KKRDQ  +E  GE S
Sbjct: 62  QWDKK--NAAKKRDQEQVELEGESS 84


>UniRef50_UPI0000583C2F Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to conserved
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 105

 Score = 83.4 bits (197), Expect = 4e-15
 Identities = 47/96 (48%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
 Frame = +3

Query: 135 SVIEFLKDLPSYDANNFTLFNTDHGIRNXL*KA-IYIFTH*DIPSEQIIVTQKTNILLRY 311
           +V E LK LP +D NNFT ++ +        K  +Y+ T  D PSEQ+I T+KTNILLRY
Sbjct: 3   AVGELLKGLPCHDENNFTKYHNEPNRSTPSKKPNVYLPTK-DYPSEQVITTEKTNILLRY 61

Query: 312 LHQQWEKKNNNSPKKRDQTHIEQNGEDSQQRKRPCL 419
           LHQQW+KKN +  KKRDQ +   + E    RK P L
Sbjct: 62  LHQQWDKKNVH--KKRDQGNANLDSESPPARKMPRL 95


>UniRef50_UPI0000EBE622 Cluster: PREDICTED: similar to Chromosome 19
           open reading frame 58; n=1; Bos taurus|Rep: PREDICTED:
           similar to Chromosome 19 open reading frame 58 - Bos
           taurus
          Length = 218

 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = +3

Query: 231 AIYIFTH*DIPSEQIIVTQKTNILLRYLHQQWEKKNNNSPKKRDQTHIEQNGEDS 395
           ++Y+ T  + PSEQIIVT+KTNILLRYLHQQW+KK  N+ KKRDQ  +E  GE S
Sbjct: 149 SVYLPTR-EYPSEQIIVTEKTNILLRYLHQQWDKK--NAAKKRDQEQVELAGESS 200


>UniRef50_Q8IP73 Cluster: CG31855-PA; n=3; Sophophora|Rep:
           CG31855-PA - Drosophila melanogaster (Fruit fly)
          Length = 109

 Score = 68.1 bits (159), Expect = 2e-10
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = +3

Query: 132 MSVIEFLKDLPSYDANNFTLFNTDHGIRNXL*KA-IYIFTH*DIPSEQIIVTQKTNILLR 308
           MSV +F+K LP +D++NFT  + +HGIR    +A +Y+ T  D  SEQ+IV  K  +LLR
Sbjct: 1   MSVRDFIKGLPIHDSSNFTHLSNEHGIRTSQKRASVYLPTE-DEHSEQLIVMDKRCVLLR 59

Query: 309 YLHQQWEKKNNNSPKKRDQTHIEQNGEDS 395
           YL QQW+KK     ++        NG  S
Sbjct: 60  YLTQQWDKKTLQRKREHGGDSGNGNGNSS 88


>UniRef50_A7T1D4 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 108

 Score = 63.3 bits (147), Expect = 5e-09
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +3

Query: 129 TMSVIEFLKDLPSYDANNFTLFNTDHGIRNXL*KA-IYIFTH*DIPSEQIIVTQKTNILL 305
           T  V + LK+LPS++  NF+ +  D   +    +  +Y+ T     +EQ IVT KTNILL
Sbjct: 3   TSRVGDLLKELPSFNQRNFSKYYRDSTCKPTNRRPLVYLPTTEVSTAEQRIVTDKTNILL 62

Query: 306 RYLHQQWEKKNNNSPKKRDQTHIEQNGEDSQQRKRP 413
           RYLHQQWE  N +  +      ++++ E    RK P
Sbjct: 63  RYLHQQWEVTNTSKKRDTVSADLQESEEMHPSRKVP 98


>UniRef50_O94398 Cluster: Mitochondrial ribosomal protein subunit
           L17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
           ribosomal protein subunit L17 - Schizosaccharomyces
           pombe (Fission yeast)
          Length = 268

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -3

Query: 609 IGTFTIKIPKVT-EPSEFHKSMYSFDLKLWN 520
           +GT  I+ P +T +PSEF KS+Y ++ +LWN
Sbjct: 43  VGTILIRSPILTRQPSEFEKSIYKYNAELWN 73


>UniRef50_Q9FFS4 Cluster: Arabidopsis thaliana genomic DNA,
           chromosome 5, P1 clone:MBK23; n=2; core
           eudicotyledons|Rep: Arabidopsis thaliana genomic DNA,
           chromosome 5, P1 clone:MBK23 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 101

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +3

Query: 150 LKDLPSYDANNFTLFN-TDHGIRNXL*KAIYIFTH*DI--PSEQIIVTQKTNILLRYLHQ 320
           L DLPS+D +NF+    +D    + +    Y  TH     P +Q+I T+  NIL+R  +Q
Sbjct: 5   LGDLPSFDPHNFSQHRPSDPSNPSKMVPTTYRPTHNRTLPPPDQVITTEVKNILIRSFYQ 64

Query: 321 QWEKKNNNSPKKRDQTHI 374
           + E+K    PK+    H+
Sbjct: 65  RAEEKLR--PKRPATDHL 80


>UniRef50_Q10SE2 Cluster: Expressed protein; n=4; Oryza sativa|Rep:
           Expressed protein - Oryza sativa subsp. japonica (Rice)
          Length = 107

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = +3

Query: 162 PSYDANNFT-LFNTDHGIRNX-L*KAIYIFTH*-DIPSEQIIVTQKTNILLRYLHQQWEK 332
           PSY+  NF+ +   D   +   +  A YI TH  D P  Q+I T   NILLR+ +Q+ E+
Sbjct: 9   PSYNPQNFSQVVPADPSAQPLNVVPATYIATHRTDPPPGQVITTDPKNILLRHFYQKSEE 68

Query: 333 KNNNSPKKRDQTHIEQNGE 389
           K        D    + NG+
Sbjct: 69  KLRPKRAAPDNLTPQNNGK 87


>UniRef50_Q97MX2 Cluster: (FS) similar to ABC transporter
           (Permease), YXDM B.subtilis ortholog; n=1; Clostridium
           acetobutylicum|Rep: (FS) similar to ABC transporter
           (Permease), YXDM B.subtilis ortholog - Clostridium
           acetobutylicum
          Length = 399

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -1

Query: 299 YVCFLCYNNLFR--RYVLVGKYIDGLLEXISNPVVRIEQCKVVRVVRRKILQEFY 141
           Y+C L Y ++F    Y L+ +Y D  +   S   + I++ ++ R+V++KIL  ++
Sbjct: 283 YICVLLYFSVFIMIHYKLMMEYKDDQMRYFSLYKIGIDEIEIKRIVKQKILMTYF 337


>UniRef50_A4XMZ8 Cluster: Transposase, IS204/IS1001/IS1096/IS1165
           family protein; n=2; Clostridiales|Rep: Transposase,
           IS204/IS1001/IS1096/IS1165 family protein -
           Caldicellulosiruptor saccharolyticus (strain ATCC 43494
           / DSM 8903)
          Length = 571

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +2

Query: 275 YCNTKNKHTIKIPTPAMGEKEQQFSKET*SDTYRTKW*R*SATQEALS 418
           Y   + K+ IKI  P + E E ++S ET    Y+TKW    A +E +S
Sbjct: 229 YIKGEIKNKIKIEMPMVREAETKYSTETKKYHYKTKWELILAVKEMIS 276


>UniRef50_Q54YG4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 888

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +3

Query: 237 YIFTH*DIPSEQIIVTQKTNILLRYLHQQWEKKNNNSPKKRDQTHIEQNGEDSQ 398
           Y F + D+P E II T+   +LL       EK NN+  +K+ Q   +QN E+ Q
Sbjct: 38  YRFNYYDVPLETIIKTKNKILLL-------EKLNNHEKQKQQQQQQQQNQENQQ 84


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,100,148
Number of Sequences: 1657284
Number of extensions: 12638016
Number of successful extensions: 32071
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 30286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32030
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)