Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0576
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0327 + 16420327-16420473,16420618-16420663,16421561-164217...    30   1.4  
04_03_0258 - 13573730-13573816,13573881-13574666,13575043-135751...    30   1.4  
12_01_0120 + 912312-912615,913145-913371,913507-913754,914293-91...    29   3.3  
03_02_0034 - 5166987-5167010,5167596-5167659,5168071-5168174,516...    28   5.7  
02_05_1158 - 34550049-34551241,34551354-34551521,34551847-345522...    28   7.5  
04_04_0430 - 25153572-25154060                                         27   9.9  

>11_04_0327 +
           16420327-16420473,16420618-16420663,16421561-16421702,
           16423700-16423779,16424487-16424677
          Length = 201

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = +3

Query: 144 EFLKDLPSYDANNFTLFNTDHGIRNXL*KAIYIFTH*-DIPSEQIIVTQKTNILLRYLHQ 320
           +FL  LPS    NF+  +    +       +Y+  H  D P  Q+I T  TNIL+R+L  
Sbjct: 29  KFLSGLPS--RGNFSSISASSTLGRL---RVYVCEHDTDPPEGQVIETDTTNILIRHLQL 83

Query: 321 QWEKKNNNSPKKRDQTHIEQNGE 389
           + ++ +    K+         GE
Sbjct: 84  KKKEMDAKEAKEARDAGSRNQGE 106


>04_03_0258 -
           13573730-13573816,13573881-13574666,13575043-13575126,
           13575254-13575322,13575324-13576228,13576517-13576784
          Length = 732

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +3

Query: 414 CLSSQIN*NPDNALTISLCLIRELCRVYVVHILH*YSTILDQ 539
           CL +     P  ++ +  CL++ + R  ++H+LH Y  + D+
Sbjct: 688 CLQNDSCQRPSMSMVVKSCLLKAIHRYILLHLLHQYYLVQDE 729


>12_01_0120 +
           912312-912615,913145-913371,913507-913754,914293-914656,
           914758-915154,915671-915693,916645-916987,917513-917532,
           918418-918527,919484-920255
          Length = 935

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +3

Query: 267 EQIIVTQKTNILLRYLHQQWEKKNNNSPKKRDQTHIEQNG 386
           E   + +  N +++Y  Q++E+ NN   K  D+T++ Q G
Sbjct: 610 ELFTIVEDENFIIKY--QKFEQLNNTQEKINDRTNVRQQG 647


>03_02_0034 -
           5166987-5167010,5167596-5167659,5168071-5168174,
           5168685-5168829,5168914-5169055,5169432-5169751,
           5169895-5170196,5170603-5170647,5171218-5171268,
           5171374-5171460,5171587-5171764,5172453-5172528,
           5173018-5173234,5173604-5173909
          Length = 686

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 327 EKKNNNSPKKRDQTHIEQNGEDSQQRKRPCLSS 425
           ++K    PK R+   +E+  E   Q  RP LSS
Sbjct: 78  KRKRQRQPKPRELNEVERMAEARHQEARPLLSS 110


>02_05_1158 -
           34550049-34551241,34551354-34551521,34551847-34552231,
           34552245-34552772
          Length = 757

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +3

Query: 279 VTQKTNILLRYLHQQWEKKNNNSPKKRDQTHIEQNGEDSQQRKRPCLSSQIN*NPDNALT 458
           V ++   L RY    W K   N  + +    +EQN  + Q R++  L  +      NA T
Sbjct: 699 VAERLESLRRYQQHPWAKAEGNEEEIQSLLGMEQNNANYQLRQQDVLGLE----EGNAYT 754

Query: 459 ISL 467
            SL
Sbjct: 755 FSL 757


>04_04_0430 - 25153572-25154060
          Length = 162

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +3

Query: 324 WEKKNNNSPKKRDQTHIEQNGEDSQQRKRP 413
           W  K+  +PKK++    ++N  +S+ +K+P
Sbjct: 42  WPSKSAPAPKKKNDDKKKKNNNNSKNKKKP 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,980,370
Number of Sequences: 37544
Number of extensions: 320642
Number of successful extensions: 785
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)