Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0576
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   1.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   1.2  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   4.9  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 315 HQQWEKKNNNSPKKRDQTHIEQNGEDSQQRKR 410
           HQQ E++     ++++Q H  Q  +  QQR++
Sbjct: 269 HQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQ 300



 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 315 HQQWEKKNNNSPKKRDQTHIEQNGEDSQQRK 407
           HQQ E++     +++ Q   +Q  + +QQR+
Sbjct: 229 HQQREQQQQQQQQQQQQQQQQQQQQRNQQRE 259


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 84   IITLTYNEKARKTYECKKQGESKIKIS 4
            II L  NE     YEC KQG+  ++ S
Sbjct: 1281 IIRLVQNEVYATEYECIKQGQQVVRKS 1307


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 340 LFFFSHCWCRYLNSMFVFCVTI 275
           +F F   +C YL+S  + CV++
Sbjct: 152 VFLFMRAFCLYLSSNVLVCVSL 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,854
Number of Sequences: 2352
Number of extensions: 14178
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)