Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0575
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    31   0.007
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.7  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 31.1 bits (67), Expect = 0.007
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 7   RLIVLFIAFDSNNTLISRFTVTSSVIKHRPRQPCRCE*YKCGD 135
           R I L   +D +   ++  TV S  +K R    C+C  YKCGD
Sbjct: 92  RTITLTHCYDPDGVRLTAETVNSMDVKLREPAECKC--YKCGD 132


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 417  SACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNP 307
            S  + + +   +PG P    RV T+ + S +VY   P
Sbjct: 983  SETVTIITAEEVPGGPPTSIRVETNDQHSLVVYWKPP 1019


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 348 CLLDILDTAGQEEYSAMRDQYMRTGEGF 431
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 348 CLLDILDTAGQEEYSAMRDQYMRTGEGF 431
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 348 CLLDILDTAGQEEYSAMRDQYMRTGEGF 431
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 348 CLLDILDTAGQEEYSAMRDQYMRTGEGF 431
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 465 FEDIGSYREQIKRVKTR 515
           FEDI S R++ + +KT+
Sbjct: 941 FEDIKSVRDKAEYIKTK 957


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 347 VFTRHPGHGWP 379
           V++RHP   WP
Sbjct: 156 VYSRHPYESWP 166


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 190 IYKIFFHTMSRH*KTTPQNHHTCITHI 110
           IY IFF    +H K        C+T++
Sbjct: 177 IYIIFFDMFYQHHKIVLDMGKNCVTYV 203


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -1

Query: 432 RILPRSACIGLSSPNTLPGQPCPGCRVNTSHRRSRLVYGTNPLS 301
           R LP S C    S ++L    CP      S  R+ L+ G   LS
Sbjct: 77  RDLPNSRCNSRESSDSLVQPRCPSGESMLS-ERAALLRGVPTLS 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,530
Number of Sequences: 336
Number of extensions: 3009
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)