Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0575
(588 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 140 1e-34
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 75 1e-14
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 56 5e-09
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 56 5e-09
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 55 7e-09
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 53 4e-08
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 51 1e-07
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 49 6e-07
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 47 2e-06
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 46 3e-06
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 46 3e-06
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 46 5e-06
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 44 1e-05
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 44 1e-05
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 39 5e-04
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 38 0.001
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 36 0.004
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 29 0.38
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 3.5
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 3.5
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 26 4.7
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 4.7
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 8.2
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 140 bits (340), Expect = 1e-34
Identities = 66/96 (68%), Positives = 79/96 (82%)
Frame = +3
Query: 255 TIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 434
TIQLIQ+HFVDEYDPTIEDSYRK+ IDGE LLD+LDTAGQEEYSAMR+QYMRTGEGFL
Sbjct: 25 TIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFL 84
Query: 435 LVFAVNSAKSFEDIGSYREQIKRVKTRKKCPWYLLA 542
LV+ + S SF++I ++ +QI RVK + P L+A
Sbjct: 85 LVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVA 120
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 509 DAEEVPMVLVGNKCDLQS 562
D + P+VLV NKCDL++
Sbjct: 110 DKDTFPVVLVANKCDLEA 127
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 74.5 bits (175), Expect = 1e-14
Identities = 31/81 (38%), Positives = 54/81 (66%)
Frame = +3
Query: 255 TIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 434
T+Q ++NHFV+ Y PTIE+++ K + G+ +I+DTAGQ+EYS + ++ G++
Sbjct: 23 TVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYV 82
Query: 435 LVFAVNSAKSFEDIGSYREQI 497
LV+++ S SFE + R++I
Sbjct: 83 LVYSITSKSSFEMVKIVRDKI 103
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 55.6 bits (128), Expect = 5e-09
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +3
Query: 261 QLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLL 437
Q + F +Y TI D K+V++D + L + DTAGQE + ++ + R + +L
Sbjct: 27 QYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVL 86
Query: 438 VFAVNSAKSFEDIGSYREQ 494
V+ VN++KSFE + S+R++
Sbjct: 87 VYDVNNSKSFETLDSWRDE 105
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 55.6 bits (128), Expect = 5e-09
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +3
Query: 261 QLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLL 437
Q + F EY TI D K VV+D + L + DTAGQE + ++ + R + ++
Sbjct: 27 QFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVI 86
Query: 438 VFAVNSAKSFEDIGSYREQIKRVKTRKKC 524
V+ VN++KSF+ + ++R++ ++ +C
Sbjct: 87 VYNVNNSKSFDSVENWRQEFLYQTSQDEC 115
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 55.2 bits (127), Expect = 7e-09
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = +3
Query: 258 IQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLL 437
I N F +Y PT+ D+Y V+I E L + DTAGQE+Y +R + FL+
Sbjct: 21 ISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLV 80
Query: 438 VFAVNSAKSFEDI 476
F+V S SFE++
Sbjct: 81 CFSVTSPASFENV 93
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 52.8 bits (121), Expect = 4e-08
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 270 QNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 449
+ +F Y+PTI ++Y + +DG + L + DTAGQEEY +R ++ FAV
Sbjct: 35 KGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAV 94
Query: 450 NSAKSFEDI 476
+S S E++
Sbjct: 95 DSRDSLENV 103
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 51.2 bits (117), Expect = 1e-07
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +3
Query: 276 HFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNS 455
+F EY PT+ ++Y +DG++ L + DTAGQEEY +R L+ FA++S
Sbjct: 32 YFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDS 91
Query: 456 AKSFEDIGSYREQIKRVKTR-KKCPWYLLATSATYSRGP 569
S E++ + + I+ + T P+ L+ A P
Sbjct: 92 PDSLENVST--KWIEEINTLCPNVPFILVGMKADLRSDP 128
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 48.8 bits (111), Expect = 6e-07
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 IQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 434
++ +N F E TI + + +V+D + I DTAGQE Y A+ Y R G L
Sbjct: 28 MRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGAL 87
Query: 435 LVFAVNSAKSFEDIGSYREQIK 500
+V+ + SF+++G + ++++
Sbjct: 88 IVYDITKQSSFDNVGRWLKELR 109
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 434
++ + + + Y TI ++ + ++G+T L I DTAGQE + + Y R G +
Sbjct: 26 LRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGII 85
Query: 435 LVFAVNSAKSFEDIGSYREQIKR 503
+V+ V SF ++ + ++I R
Sbjct: 86 IVYDVTDQDSFNNVKQWLQEIDR 108
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 46.4 bits (105), Expect = 3e-06
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +3
Query: 279 FVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSA 458
F + Y PT+ ++Y V +DG L + DTAGQE+Y +R L+ FAV+S
Sbjct: 31 FPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSP 90
Query: 459 KSFEDI 476
S +++
Sbjct: 91 DSLDNV 96
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 46.4 bits (105), Expect = 3e-06
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 434
++ ++ F + TI ++ + + +DG+ L I DTAGQE + + Y R G L
Sbjct: 27 LRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIL 86
Query: 435 LVFAVNSAKSFEDIGSYREQIKR 503
L++ V KSF+++ ++ +++
Sbjct: 87 LLYDVTDKKSFDNVRTWFSNVEQ 109
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 45.6 bits (103), Expect = 5e-06
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 IQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMRTGEGF 431
++ +++ F D + TI ++ Q + ID T + L+I DTAGQE Y ++ Y R
Sbjct: 32 LRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCA 91
Query: 432 LLVFAVNSAKSFEDIGSYREQIKR 503
++V+ + A S E S+ ++++R
Sbjct: 92 IVVYDITQAASLEKAKSWIKELQR 115
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 44.4 bits (100), Expect = 1e-05
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 279 FVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSA 458
F + Y PT+ ++Y V +DG L + DTAGQE+Y +R L+ F+V++
Sbjct: 31 FPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAP 90
Query: 459 KSFEDI 476
+S +++
Sbjct: 91 ESLDNV 96
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 44.4 bits (100), Expect = 1e-05
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +3
Query: 261 QLIQNHFVDEYDPTIEDSYRKQVVIDG-----ETCLLDILDTAGQEEYSAMRDQYMRTGE 425
+ ++N + D+ T+ + +++ G + L I DTAGQE++ ++ Y R
Sbjct: 28 RFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAA 87
Query: 426 GFLLVFAVNSAKSFEDIGSYREQIKRVKTRKKC 524
G +LV+ V + SFE++ S+ I+ + C
Sbjct: 88 GAVLVYDVTNKDSFEELSSWLSDIRAMAPSTIC 120
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 39.1 bits (87), Expect = 5e-04
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +3
Query: 264 LIQNHFVDEYDPTIE-----DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEG 428
LI D++D T + D K + ++ T L + DTAGQE + ++ Y+R
Sbjct: 27 LITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSV 86
Query: 429 FLLVFAVNSAKSFEDIGSYREQIK 500
++V+ + + SF + + E ++
Sbjct: 87 AIIVYDITNHNSFVNTEKWIEDVR 110
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 339 GETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRV 506
GE C ++ DTAGQE+ +RD Y G+ +++F V S +++++ + + RV
Sbjct: 56 GEICF-NVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRV 110
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 35.9 bits (79), Expect = 0.004
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 279 FVDEYDPTIEDSYRKQVVIDGETCLLDIL--DTAGQEEYSAMRDQYMRTGEGFLLVFAVN 452
F + Y PT+ ++Y + + ++++ DTAGQEEY +R LL F+++
Sbjct: 39 FPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSID 98
Query: 453 SAKSFEDI 476
S ++
Sbjct: 99 CPASLNNV 106
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 29.5 bits (63), Expect = 0.38
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 333 IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKT 512
I E+ +L+ + +A +++ + TG F L VNS S + R VK
Sbjct: 86 ISSESAILEDMISANATDFTVPQTNLETTGIAFQLT--VNSLSSSNQLSVIRSSTNTVKG 143
Query: 513 RKKCP 527
RKK P
Sbjct: 144 RKKNP 148
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 3.5
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 475 MSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITT-CLRYESSI 302
+S L + LTA +S+N V + L E + + SK +SP++ C RY+SS+
Sbjct: 428 ISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQSLSK-MSPTLNDFCRRYDSSM 485
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 393 PNTLPGQPCPGCRVNTSHRRSRLVYGTN 310
P+T P QPC ++ T + R+VY N
Sbjct: 13 PSTKPSQPC---KIGTDFKGERIVYPAN 37
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 25.8 bits (54), Expect = 4.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 358 SSKHVSPSITTCLRYESSIVGSYSSTK*FCISCIVMRIYQR-LPHPQPP 215
S++H++ + L YE+ + SY S K +S + RI + L QPP
Sbjct: 224 SNRHINDQLIRLLSYETKLKESYPSLK-RIVSNVFDRIEKEILKRVQPP 271
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 4.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 484 YEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSS 353
Y+ +S+ + A + S N PVR S++AE+ AV + S
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVLAEFFGSQAVFVLES 715
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.0 bits (52), Expect = 8.2
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +3
Query: 345 TCLLDILDTAGQEEYSAMRDQYMRTGE-GFLLVFAVNSAKSFEDIGSYR----EQIKRVK 509
+C+LD++ T ++ Y R + M+ + G + +++AK E+ + R EQ++ +
Sbjct: 274 SCMLDLIQTTEEKLYEQYRQEQMKVRQYGEPKLRTIDNAKFKEEEENLRKRFTEQVRVEE 333
Query: 510 TR 515
TR
Sbjct: 334 TR 335
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,497,998
Number of Sequences: 5004
Number of extensions: 53016
Number of successful extensions: 188
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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