Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0575
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    54   5e-09
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            44   4e-06
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    30   0.064
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    30   0.064
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.4  
AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like pepti...    23   5.5  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   7.3  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 53.6 bits (123), Expect = 5e-09
 Identities = 28/75 (37%), Positives = 41/75 (54%)
 Frame = +3

Query: 258 IQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLL 437
           I    + F  EY PT  D+Y   +V+DG    L + DTAGQE+Y  +R       + FL+
Sbjct: 24  ISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLI 83

Query: 438 VFAVNSAKSFEDIGS 482
            ++V S  SFE++ S
Sbjct: 84  CYSVASPSSFENVTS 98


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 44.0 bits (99), Expect = 4e-06
 Identities = 21/83 (25%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +3

Query: 258 IQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFL 434
           ++ ++  F +  + TI  ++  Q + ID  T   +I DTAGQE Y ++   Y R  +  +
Sbjct: 42  LRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAI 101

Query: 435 LVFAVNSAKSFEDIGSYREQIKR 503
           +V+ + ++ SF    ++ ++++R
Sbjct: 102 VVYDIQNSDSFARAKTWVKELQR 124


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 29.9 bits (64), Expect = 0.064
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 369 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDI 476
           +AGQE+Y  +R       + FL+ F+V S  SFE++
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV 36


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 29.9 bits (64), Expect = 0.064
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -1

Query: 366 PGCRVNTSHRRSRLVYGTNPLSWDRIRPRS 277
           P CR   + RRSR    T P SW R RP S
Sbjct: 269 PSCRSPPARRRSR---STRPTSWPRSRPTS 295



 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 508 RRGRSAHGTCWQQVRPTVVGRR 573
           RR RS   T W + RPT   +R
Sbjct: 278 RRSRSTRPTSWPRSRPTSKPKR 299


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +3

Query: 264 LIQNHFVDEYDPTIEDSYRKQVVID-GET---CLLDILDTAGQEEYSAMRDQYMRTGEGF 431
           L++N  + +Y  T  D  R  V  D GE    C L +L    + EYSA  D Y    EGF
Sbjct: 472 LMENSVMKKYT-TKSDQARHYVQYDQGEDRWLCTL-LLKQKFRVEYSAASDAYTHAPEGF 529


>AY324308-1|AAQ89693.1|  134|Anopheles gambiae insulin-like peptide
           2 precursor protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -1

Query: 393 PNTLP-GQPCPGCRVNTSHRRS 331
           P+TLP G P PG  V+   RRS
Sbjct: 90  PDTLPPGFPYPGAGVHRRSRRS 111


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -3

Query: 502 RLICSRYEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYS 383
           R    R+  +   LL ++  +   NP   R+Y  L++ Y+
Sbjct: 9   RSFADRWMTLGIVLLCMVIGSVWANPDAKRLYDDLLSNYN 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,798
Number of Sequences: 2352
Number of extensions: 13560
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)