Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0574
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 130 7e-31
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 128 3e-30
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 55 5e-08
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 55 5e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 49 3e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 48 6e-06
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 37 0.015
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 37 0.015
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 37 0.015
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 35 0.060
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 34 0.10
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 34 0.10
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 33 0.24
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 33 0.24
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 33 0.24
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 33 0.24
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 33 0.24
Z81549-2|CAB04473.1| 167|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 0.56
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 31 0.98
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 3.0
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 3.0
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 29 3.0
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 3.9
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 130 bits (315), Expect = 7e-31
Identities = 79/146 (54%), Positives = 89/146 (60%), Gaps = 8/146 (5%)
Frame = +3
Query: 255 CITIKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSE 410
CITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSE
Sbjct: 67 CITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSE 126
Query: 411 VTAALRVTDGALXXXXXXXXXXXQTETVLRQAMPSASSLFCS*TKWTVLFLSSNLKLKNY 590
VTAALRVTDGAL QTETVLRQA+ K L L +
Sbjct: 127 VTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEEL 186
Query: 591 TRRSSVL*KMLNVIIATYNDDGGPMG 668
+ + + +NVIIATY DD GPMG
Sbjct: 187 FQTFQRIVENINVIIATYGDDDGPMG 212
Score = 128 bits (310), Expect = 3e-30
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +1
Query: 58 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 237
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 238 KDEQDR 255
KDEQ+R
Sbjct: 61 KDEQER 66
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 128 bits (310), Expect = 3e-30
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +1
Query: 58 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 237
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAG++AGETRFTDTR
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTR 60
Query: 238 KDEQDR 255
KDEQ+R
Sbjct: 61 KDEQER 66
Score = 128 bits (308), Expect = 5e-30
Identities = 78/146 (53%), Positives = 88/146 (60%), Gaps = 8/146 (5%)
Frame = +3
Query: 255 CITIKSTAISMFFELEEKDLVFITNPDQRE------KSEK--GFLINLIDSPGHVDFSSE 410
CITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLINLIDSPGHVDFSSE
Sbjct: 67 CITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSE 126
Query: 411 VTAALRVTDGALXXXXXXXXXXXQTETVLRQAMPSASSLFCS*TKWTVLFLSSNLKLKNY 590
VTAAL VTDGAL QTETVLRQA+ K L L +
Sbjct: 127 VTAALGVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEEL 186
Query: 591 TRRSSVL*KMLNVIIATYNDDGGPMG 668
+ + + +NVIIATY DD GPMG
Sbjct: 187 FQTFQRIVENINVIIATYGDDDGPMG 212
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +1
Query: 109 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 255
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+ R+ D+R+DEQ R
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTR 67
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +3
Query: 363 LINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAMPSASSL 527
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ + + ++
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNGQAM 138
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +1
Query: 109 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 255
+IRN+ ++AHVDHGK++ DSLVS +I+ AG+ R+ D+R+DEQ R
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTR 67
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +3
Query: 363 LINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAMPSASSL 527
LINLIDSPGHVDFS EVT+AL ++D AL QTE ++RQ + + ++
Sbjct: 84 LINLIDSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNGQAM 138
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/117 (29%), Positives = 59/117 (50%)
Frame = +3
Query: 315 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETV 494
V I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE
Sbjct: 189 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 245
Query: 495 LRQAMPSASSLFCS*TKWTVLFLSSNLKLKNYTRRSSVL*KMLNVIIATYNDDGGPM 665
+R A+ ++ +K L L L + + ++ +N I++T+ ++ P+
Sbjct: 246 IRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEEDVPV 302
Score = 35.9 bits (79), Expect = 0.026
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 91 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDRASPL 267
+MD +RN+++ H+ HGK+T D L+ + A + RFTD E+ R +
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSI 184
Query: 268 NLRP 279
+P
Sbjct: 185 KSQP 188
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/117 (29%), Positives = 59/117 (50%)
Frame = +3
Query: 315 VFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETV 494
V I D R KS +L+N+ID+PGHV+FS E+TA+ R+ DG + TE
Sbjct: 64 VSIVAQDSRSKS---YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERA 120
Query: 495 LRQAMPSASSLFCS*TKWTVLFLSSNLKLKNYTRRSSVL*KMLNVIIATYNDDGGPM 665
+R A+ ++ +K L L L + + ++ +N I++T+ ++ P+
Sbjct: 121 IRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEEDVPV 177
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKA-GIIAGARAGETRFTDTRKDEQDRASPLN 270
MD +RN+++ H+ HGK+T D L+ + A + RFTD E+ R +
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIK 60
Query: 271 LRP 279
+P
Sbjct: 61 SQP 63
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = +3
Query: 357 GFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 503
G IN+ID+PGHVDF+ EV ALRV DGA+ QT TV RQ
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQ 159
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 112 IRNMSVIAHVDHGKSTLTDSLVSKAGII 195
IRN+ + AH+D GK+T+T+ ++ AG I
Sbjct: 44 IRNIGISAHIDSGKTTVTERILYYAGRI 71
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +3
Query: 354 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 446
+G+L+NLID+PGHVDFS+EV+ +L V DG L
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSLAVCDGIL 130
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 112 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 255
IRN ++AHVDHGKSTL D L+ G + G+ + D + E++R
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLLEMCGAVP---PGQKQMLDKLQVERER 86
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 354 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 506
KG INLID+PGHVDF EV +RV DG + QT TV RQ+
Sbjct: 88 KGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQS 138
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 112 IRNMSVIAHVDHGKSTLTDSLVSKAGII 195
+RN+ VIAHVD GK+T+T+ L+ AG I
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLLYLAGAI 52
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLN 270
N+ I HVDHGK+TLT ++ GA+ + D +E+ R +N
Sbjct: 51 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 101
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLN 270
N+ I HVDHGK+TLT ++ GA+ + D +E+ R +N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLN 270
N+ I HVDHGK+TLT ++ GA+ + D +E+ R +N
Sbjct: 52 NVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITIN 102
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.060
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +1
Query: 43 HKPSKMVNFTVDEIRGMMDKKRN-IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET 219
H P K+ DE+ M ++KRN + N A+++ + +S+ S I G A
Sbjct: 610 HVPEKVAEDIADEVARMTEQKRNYMENHRDYANLNRRVDQMQESVFSIVDRIEGVNATLQ 669
Query: 220 RFTDTRKDEQDRASPLNLRPSLCSSSLKRKI*YSSQTLTSV 342
R +QD + ++L L + R+ T+TS+
Sbjct: 670 TIEKQRVQQQDGGNLMDLSALLTNQVRNRESAARRPTITSI 710
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLRPSLCSSS 297
N+ I H+DHGK+TLT ++ A+ + D K+E+ R +N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 298 LKR 306
L+R
Sbjct: 107 LRR 109
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLRPSLCSSS 297
N+ I H+DHGK+TLT ++ A+ + D K+E+ R +N+ S
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESP 106
Query: 298 LKR 306
L+R
Sbjct: 107 LRR 109
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 32
>Z81549-2|CAB04473.1| 167|Caenorhabditis elegans Hypothetical
protein F55C9.3 protein.
Length = 167
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 625 FNIFYNTLERLV*FFSFKLELKKSTVH 545
FN F+NT +++ FSF L LKK+TVH
Sbjct: 138 FNCFFNTFKQIKFIFSF-LNLKKNTVH 163
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 97 DKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 222
D +R ++++ HVDHGK+TL D++ + I AG G T+
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM-RNSQIAAGEFGGITQ 191
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 30.7 bits (66), Expect = 0.98
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 124 SVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLRPSLCSSSLK 303
+++ D GK+TL ++L S AG G A +F TR+ S +N R SS
Sbjct: 51 AIVGVADSGKTTLLEALTSGAGGDIGGIAMLDKFMLTRRRFNKFCSHINYRNQYPSSLSV 110
Query: 304 RKI*Y 318
R + Y
Sbjct: 111 RSLLY 115
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 145 DRRGRSQTCCGYSASCPSSHG 83
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 145 DRRGRSQTCCGYSASCPSSHG 83
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 379 SIKLIKXPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDLMVMHGL 248
S+ L+ PF L +R +G+ + FSS S + MAV ++ + +
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVLSLQSV 111
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 60 GEFHGRRDPWDDGQEAEYPQHVCDR 134
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 60 GEFHGRRDPWDDGQEAEYPQHVCDR 134
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIA-GARAGETRFTDTRKDEQD 252
N+ ++ HVD GK+TLT + A A A T R++ D
Sbjct: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLD 60
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIA-GARAGETRFTDTRKDEQD 252
N+ ++ HVD GK+TLT + A A A T R++ D
Sbjct: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLD 60
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 106 RNIRNMSVIAHVDHGKSTLTDSLVSKAGII 195
+++ N+ V+ HVD GKSTL L+ ++
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVV 197
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 106 RNIRNMSVIAHVDHGKSTLTDSLVSKAGII 195
+++ N+ V+ HVD GKSTL L+ ++
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVV 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,571,628
Number of Sequences: 27780
Number of extensions: 282973
Number of successful extensions: 767
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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