Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0574
(668 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 99 2e-21
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 56 2e-08
At5g13650.2 68418.m01585 elongation factor family protein contai... 55 5e-08
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 54 9e-08
At5g13650.1 68418.m01584 elongation factor family protein contai... 53 2e-07
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 51 6e-07
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 51 6e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 50 2e-06
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 49 3e-06
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 49 3e-06
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 48 4e-06
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 48 6e-06
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 46 3e-05
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 31 0.69
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 30 1.2
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 30 1.2
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.6
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 30 1.6
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.8
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 3.7
At4g05632.1 68417.m00875 hypothetical protein 27 8.5
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +1
Query: 58 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 237
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 238 KDEQDR 255
DE +R
Sbjct: 61 ADEAER 66
Score = 96.7 bits (230), Expect = 1e-20
Identities = 60/131 (45%), Positives = 78/131 (59%)
Frame = +3
Query: 258 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 437
ITIKST IS+++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTAALR+TD
Sbjct: 68 ITIKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTAALRITD 123
Query: 438 GALXXXXXXXXXXXQTETVLRQAMPSASSLFCS*TKWTVLFLSSNLKLKNYTRRSSVL*K 617
GAL QTETVLRQA+ + K FL + + + S + +
Sbjct: 124 GALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIE 183
Query: 618 MLNVIIATYND 650
NVI+ATY D
Sbjct: 184 NANVIMATYED 194
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +3
Query: 354 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQA 506
K + +NLIDSPGH+DF SEV+ A R++DGAL QT VLRQA
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 106 RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDRASPLNLRP 279
R +RN+ ++AHVDHGK+TL D L+ S G++ AG+ RF D +EQ RA + ++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRA--ITMKS 64
Query: 280 SLCSSSLKRK 309
S S SLK K
Sbjct: 65 S--SISLKYK 72
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/69 (33%), Positives = 44/69 (63%)
Frame = +1
Query: 49 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 228
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 229 DTRKDEQDR 255
D+ E++R
Sbjct: 122 DSNDLERER 130
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 354 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAM 509
K +N+ID+PGH DF EV L + DG L QT VL++A+
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 195
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = +3
Query: 267 KSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 446
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Query: 447 XXXXXXXXXXXQTETVLRQA 506
Q+ETV RQA
Sbjct: 190 CLFDSVAGVEPQSETVWRQA 209
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +1
Query: 106 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDR 255
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQER 145
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/54 (37%), Positives = 38/54 (70%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 255
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERER 129
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 354 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAM 509
K +N+ID+PGH DF EV L + DG L QT VL++A+
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 194
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 342 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAM 509
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+ TE +R A+
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAI 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 88 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 255
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 342 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAM 509
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+ TE +R A+
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAI 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 88 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 255
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +1
Query: 109 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRASPLNLR 276
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R + L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 360 FLINLIDSPGHVDFSSEVTAALRVTDGAL 446
F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGAL 180
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +3
Query: 354 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 503
K + +N+ID+PGHVDF+ EV ALRV DGA+ Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 195
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +3
Query: 354 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQ 503
K + +N+ID+PGHVDF+ EV ALRV DGA+ Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 195
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +3
Query: 342 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAM 509
+ K +L N++D+PG+V+FS E+TA+LR+ DGA+ TE +R A+
Sbjct: 189 DSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAI 244
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +1
Query: 88 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 255
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQER 174
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +3
Query: 258 ITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 437
IT+K+ +MF+E + +D + G+L+NLID+PGHVDFS EV+ +L
Sbjct: 112 ITVKAQTATMFYENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 438 GAL 446
GAL
Sbjct: 161 GAL 163
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +1
Query: 112 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQ 249
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D + E+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLDKLQRER 110
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +1
Query: 64 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 243
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 244 EQDRASPLN 270
E+ R +N
Sbjct: 123 ERARGITIN 131
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 94 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 189
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 240 GRTRPCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGF-LINLIDS 383
G+ RPC+ T + +E LV I N D + E+G +IN+ DS
Sbjct: 709 GKKRPCMRKVFTDLEKILASQEDSLVNIENDDGADDEEEGMTMINIDDS 757
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 255
N+ I HVDHGK+TLT ++ A+A D +E+ R
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKR 114
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 121 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 222
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 131 SPTSITASQPSRTRWFPRPVSLLVRE 208
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 118 NMSVIAHVDHGKSTLTDSLVSKAGIIA 198
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 131 SPTSITASQPSRTRWFPRPVSLLVRE 208
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 121 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 213
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At4g05632.1 68417.m00875 hypothetical protein
Length = 197
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 221 VSLTRVRTNKTVHHH*IYGHLYVLR-A*RERFSIHHK 328
VSL+R + + HH +Y HL LR + E SIH +
Sbjct: 62 VSLSRTKQGSALEHHKLYMHLTKLRQSVLEASSIHDR 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,812,486
Number of Sequences: 28952
Number of extensions: 264283
Number of successful extensions: 753
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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