Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0573
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GSV9 Cluster: Ornithine decarboxylase antizyme; n=1; ...    89   9e-17
UniRef50_UPI0000D567E1 Cluster: PREDICTED: similar to Ornithine ...    36   0.86 
UniRef50_A0UDQ7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  

>UniRef50_Q9GSV9 Cluster: Ornithine decarboxylase antizyme; n=1;
           Bombyx mori|Rep: Ornithine decarboxylase antizyme -
           Bombyx mori (Silk moth)
          Length = 261

 Score = 89.0 bits (211), Expect = 9e-17
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +3

Query: 537 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMY 656
           VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMY
Sbjct: 141 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVHNNMMY 180



 Score = 84.6 bits (200), Expect = 2e-15
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = +2

Query: 119 MTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDG 235
           MTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDG
Sbjct: 1   MTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDG 39



 Score = 82.2 bits (194), Expect = 1e-14
 Identities = 40/73 (54%), Positives = 40/73 (54%)
 Frame = +1

Query: 289 ECFSLXLGAGPLWWS*CPCSRLCTARRVTGGAASPATPXTPNHDDNRDXXXXXXXXXXXX 468
           ECFSL LGAGPLWWS  P         VTGGAASPATP TPNHDDNRD            
Sbjct: 58  ECFSLCLGAGPLWWSDVPAHGSAPPGGVTGGAASPATPATPNHDDNRDLLSALLWSSSSS 117

Query: 469 XXXXXXXXHDGQA 507
                   HDGQA
Sbjct: 118 LASSAESLHDGQA 130


>UniRef50_UPI0000D567E1 Cluster: PREDICTED: similar to Ornithine
           decarboxylase antizyme (ODC-Az); n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to Ornithine
           decarboxylase antizyme (ODC-Az) - Tribolium castaneum
          Length = 150

 Score = 35.9 bits (79), Expect = 0.86
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 287 PSVSRCXWAPGLCGGPD 337
           P  + C WAPGLCGGPD
Sbjct: 21  PIATTCLWAPGLCGGPD 37


>UniRef50_A0UDQ7 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia multivorans ATCC 17616|Rep: Putative
           uncharacterized protein - Burkholderia multivorans ATCC
           17616
          Length = 581

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 349 VSRDIRTTTEARRPGTARNTRR--PKPTELSACCGSAQRRPV 230
           V  D   +    RPG AR++RR  P P  +  C GS  RRPV
Sbjct: 104 VEHDETASLWPARPGKARHSRRGRPHPRSVRPCAGSRGRRPV 145


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,188,281
Number of Sequences: 1657284
Number of extensions: 9309981
Number of successful extensions: 25017
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25004
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)