Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0573
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0665 - 18506221-18506271,18506331-18506401,18507097-185071...    31   0.61 
04_01_0613 - 8042568-8042686,8043107-8043206,8043550-8043594,804...    29   2.5  
05_03_0408 + 13601576-13601748,13601795-13602104,13602597-136028...    29   3.3  
12_02_1275 - 27482784-27483272                                         28   5.7  
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850...    28   7.5  
09_06_0293 + 22086359-22086496,22086604-22087213,22087407-220879...    27   9.9  
01_06_0997 + 33676441-33676758,33678223-33678314,33678443-336785...    27   9.9  

>04_03_0665 -
           18506221-18506271,18506331-18506401,18507097-18507169,
           18507476-18507805
          Length = 174

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 175 WKWCGLRRDQTGREG 219
           W WCGLRR + GR G
Sbjct: 65  WMWCGLRRSKAGRRG 79


>04_01_0613 -
           8042568-8042686,8043107-8043206,8043550-8043594,
           8043691-8043770,8045082-8046322,8047077-8047507
          Length = 671

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 201 PNRSRRFIPVTGRL*ALPQQALSSVGFGRRVFLAVPGRRASVVVLMSLLTA 353
           P+  R +I V  R  A P+ AL++    RRV L  PGRRA   +L ++  A
Sbjct: 33  PDLDRAYISVI-RAAAAPRLALAAFACLRRVGLPAPGRRALPSLLRAIAFA 82


>05_03_0408 +
           13601576-13601748,13601795-13602104,13602597-13602834,
           13603014-13603364,13603457-13603542,13603685-13603759,
           13604241-13604542,13605359-13605622,13606032-13606806
          Length = 857

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 186 WTPSRPNRSRRFIPVTGRL*ALPQQALSSVGFGRRVFLAVPGR 314
           + P+RP R RRF+P+ G     P+ A      GR     VP R
Sbjct: 716 YPPNRPTRCRRFVPLPGS----PEMAQLEADPGRFFLETVPDR 754


>12_02_1275 - 27482784-27483272
          Length = 162

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 172 QWKWCGLRRDQTGREG 219
           +W W GLRR +TGR G
Sbjct: 144 RWVWRGLRRTKTGRRG 159


>02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,
            8509204-8509553,8509631-8509729,8509811-8510105,
            8510200-8510405,8510498-8510689,8510766-8511163,
            8511258-8511444,8511473-8511528,8511800-8511872,
            8512012-8512872,8514353-8514778
          Length = 1134

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 352  AVSRDIRTTTEARRPGTARNTRRPKPTELSAC-CGSAQRRP 233
            A S+D R T +  RP T    R P P    AC  G   +RP
Sbjct: 1027 APSQDWRYTPDVPRPRTRGRRRGPSPAIQKACWAGPRPKRP 1067


>09_06_0293 +
           22086359-22086496,22086604-22087213,22087407-22087938,
           22088617-22089151
          Length = 604

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 172 QWKWCGLRRDQTGREG 219
           +W W GLRR +TGR G
Sbjct: 558 RWVWRGLRRIKTGRRG 573


>01_06_0997 +
           33676441-33676758,33678223-33678314,33678443-33678540,
           33678824-33678979,33679106-33679731,33679826-33679896,
           33679987-33680241,33680337-33680454,33680595-33680766,
           33680854-33681395
          Length = 815

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 172 QWKWCGLRRDQTGREG 219
           +W+W GLRR + GR G
Sbjct: 64  RWEWHGLRRTKAGRRG 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,894,733
Number of Sequences: 37544
Number of extensions: 276433
Number of successful extensions: 695
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)