Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0572
         (615 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q555K3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_A2ERS7 Cluster: Type III restriction enzyme, res subuni...    33   5.4  
UniRef50_Q8WPQ3 Cluster: Hypothetical transmembrane protein; n=1...    33   7.1  
UniRef50_A2ZKH5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_Q555K3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1004

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = -1

Query: 594 EKIGSTVVT-TREAHKISYHIPVTRIVEHEVLLIQGTSKNPSQRLELQMIQAVAALASL 421
           E++G+T+ + T  A +   HIP+T +++  + L  G +KN SQ+   ++IQ +  L+ +
Sbjct: 622 EEMGTTLPSLTPIASQTLSHIPMTALLDSSLFLNNGNNKNNSQKDNQKIIQPLQTLSPI 680


>UniRef50_A2ERS7 Cluster: Type III restriction enzyme, res subunit
           family protein; n=9; Trichomonas vaginalis G3|Rep: Type
           III restriction enzyme, res subunit family protein -
           Trichomonas vaginalis G3
          Length = 1961

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 28/118 (23%), Positives = 51/118 (43%)
 Frame = -1

Query: 594 EKIGSTVVTTREAHKISYHIPVTRIVEHEVLLIQGTSKNPSQRLELQMIQAVAALASLLK 415
           E  G T +T+ E  +   HI V    + +V   +     P+ RL+L +I  +  L     
Sbjct: 245 EYTGDTSLTSLELDRS--HILVATPEKWDVATRKAGENAPAARLKLLIIDEIHLLQDERG 302

Query: 414 PLIGFYCTCSISQKKNTRNLEEIKAISDCWPNHIYNYNYLNFSIQPCFCCGRIPKPYP 241
           P++      ++ Q +  +++  I  +S   PN+    N+L  + Q  F  G   +P P
Sbjct: 303 PVLEALVARTLRQVEQQQSMIRIVGLSATLPNYTDVANFLRVNDQGMFFFGPEYRPVP 360


>UniRef50_Q8WPQ3 Cluster: Hypothetical transmembrane protein; n=1;
           Trypanosoma brucei|Rep: Hypothetical transmembrane
           protein - Trypanosoma brucei
          Length = 108

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 429 ASLLKPLIGFYCTCSISQKKNTRNLEEIKAISDCWPNHIYNYNYL 295
           AS + PL  F+  C   +    RN++ +KA++ C  ++   YNY+
Sbjct: 19  ASTITPLSPFFSICHGREIVTERNMQTLKAVTGCAVSYTTCYNYV 63


>UniRef50_A2ZKH5 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 1277

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 333 DCWPNHIYNYNYLNFSIQPCF-CCGRIPKPY 244
           D  P    +YNYL F +Q CF CC   P+ Y
Sbjct: 504 DIMPALKLSYNYLPFHLQQCFSCCALFPEDY 534


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,738,692
Number of Sequences: 1657284
Number of extensions: 9766742
Number of successful extensions: 20515
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20514
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)