Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0572
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   3.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   3.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -1

Query: 381 SQKKNTRNLEEIKAISDCWPNHIYNYNYLNFSIQPCFCCGRI 256
           + +K   +L EIK +SDC  +      Y+   +   F  G I
Sbjct: 408 NSEKKCGSLREIKEVSDCDSSESRKEVYVRVPLGQRFSNGEI 449


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 258 FGHNKNRAVSRNLNSYNYKYDLAN 329
           +GH+       + N YNY  D+ N
Sbjct: 8   YGHHSQHGTYPSDNYYNYTSDIPN 31


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 337 YCFNFFEISCVFFLGYRTGT 396
           YCFN++ I    F   RT T
Sbjct: 76  YCFNYYVIVVTTFYKRRTWT 95


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 506 TSCSTIRVTGMW*DILWASRVVTTVLPI 589
           T C  I++TG+W   L   RV+ +V+ +
Sbjct: 752 TGCVRIKITGVWLKFL---RVILSVVGV 776


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 258 FGHNKNRAVSRNLNSYNYKYDLAN 329
           +GH+       + N YNY  D+ N
Sbjct: 8   YGHHSQHGTYPSDNYYNYTSDIPN 31


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 258 FGHNKNRAVSRNLNSYNYKYDLAN 329
           +GH+       + N YNY  D+ N
Sbjct: 8   YGHHSQHGTYPSDNYYNYTSDIPN 31


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -1

Query: 477 PSQRLELQMIQAVAALASLLKPLIGFY 397
           P+ R +L +   +  L +++KP+I FY
Sbjct: 108 PNLRPKLLLKHNLFLLDNIVKPIIAFY 134


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 225 HL*IFFCRYKYYYF*TLTLC 166
           HL +  C Y +YY   L  C
Sbjct: 251 HLLLLVCIYYFYYMHLLFCC 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,017
Number of Sequences: 336
Number of extensions: 2955
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)