Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0572
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z66520-8|CAE17837.1|  357|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z77664-2|CAB01217.1|  643|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z73970-5|CAA98248.1|  643|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z84574-6|CAE17784.1|  174|Caenorhabditis elegans Hypothetical
           protein F33E2.7 protein.
          Length = 174

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 337 YCFNFFEISCVFFLGYRTGTIKTDE 411
           +CFNFF+I+C +++   T T  TD+
Sbjct: 29  HCFNFFQIACHYYI---TNTSPTDD 50


>Z66520-8|CAE17837.1|  357|Caenorhabditis elegans Hypothetical
           protein F49E12.12 protein.
          Length = 357

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = -1

Query: 531 VTRIVEHEVLLIQGTS---KNPSQRLELQMIQAVAALASLLKPLIGFYCTC 388
           +T ++   ++LI+ +    +NPS+ ++++ I  V  L  L+  + G + TC
Sbjct: 143 ITVLLRMVIILIRTSDVLLQNPSKWIKIRCIGCVCTLTDLMVSIFGMFVTC 193


>Z77664-2|CAB01217.1|  643|Caenorhabditis elegans Hypothetical
           protein C29A12.6 protein.
          Length = 643

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 381 SQKKNTRNLEEIKAISDCWPNHIYNYNYLNFSIQPCFCC 265
           S +K  R L   K +S  WP+ I  ++ L  SIQ    C
Sbjct: 68  SAEKRIRKLFSSKKMSRFWPSSIALFSILLISIQQTLAC 106


>Z73970-5|CAA98248.1|  643|Caenorhabditis elegans Hypothetical
           protein C29A12.6 protein.
          Length = 643

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 381 SQKKNTRNLEEIKAISDCWPNHIYNYNYLNFSIQPCFCC 265
           S +K  R L   K +S  WP+ I  ++ L  SIQ    C
Sbjct: 68  SAEKRIRKLFSSKKMSRFWPSSIALFSILLISIQQTLAC 106


>Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical
           protein C53D6.3 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +1

Query: 427 CQGRYCLNHLKFQTLTWIL*CSLNEKNFVLHNTCHRYVVGYLVGFPGSYHRATYFLR 597
           C+G   LNH     L     C +N K   +HN+  R V  +L+ FP       Y +R
Sbjct: 118 CKGNLSLNHQVLDRLWTPNSCFINSKVAQIHNSPFRSV--FLMLFPNGTVMVNYRVR 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,641,070
Number of Sequences: 27780
Number of extensions: 245008
Number of successful extensions: 553
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)