Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0570
         (845 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5UNL4 Cluster: Adhesin-like protein; n=1; Methanobrevi...    35   2.2  
UniRef50_Q2KCW4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_A5UNL4 Cluster: Adhesin-like protein; n=1;
            Methanobrevibacter smithii ATCC 35061|Rep: Adhesin-like
            protein - Methanobrevibacter smithii (strain PS / ATCC
            35061 / DSM 861)
          Length = 1702

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = -1

Query: 431  SKLDPFDRKCSAAAGSVEVREAFDLTLGARDTVQLESECKIKSRKSSRLNIK*KSNLTIN 252
            S   P D     AAGSVEV+    LT   +D   + S  K+   KS+  NI    NL   
Sbjct: 853  SNRGPNDANIYNAAGSVEVKNWVILTFDIQDNTLIASLNKVTDNKSNIYNI--SGNLPSR 910

Query: 251  LPLYNTETYTLN 216
            + ++N+    +N
Sbjct: 911  IAIFNSSMVKIN 922


>UniRef50_Q2KCW4 Cluster: Putative uncharacterized protein; n=1;
           Rhizobium etli CFN 42|Rep: Putative uncharacterized
           protein - Rhizobium etli (strain CFN 42 / ATCC 51251)
          Length = 259

 Score = 33.1 bits (72), Expect = 9.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 520 QYLINSQCDV*YEISIYSLLQRIKIDNPLRSLLAA 624
           QY +N Q D  Y+  +Y+L+   + DNP R L  A
Sbjct: 161 QYGVNVQADYGYQNGVYNLIDAARFDNPQRGLAEA 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,387,899
Number of Sequences: 1657284
Number of extensions: 13997865
Number of successful extensions: 30950
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30928
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)