Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0570
(845 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like (e... 31 6.9
AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like (e... 31 6.9
AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like (e... 31 6.9
AJ225682-1|CAA12563.1| 75|Homo sapiens Ig heavy chain variable... 31 6.9
DQ100673-1|AAZ08680.1| 130|Homo sapiens immunoglobulin heavy ch... 30 9.2
BC114938-1|AAI14939.1| 1551|Homo sapiens dual oxidase 1 protein. 30 9.2
BC114628-1|AAI14629.1| 1551|Homo sapiens dual oxidase 1 protein. 30 9.2
AK172859-1|BAD18816.1| 456|Homo sapiens protein ( Homo sapiens ... 30 9.2
AF230495-1|AAF73921.1| 1551|Homo sapiens NADPH thyroid oxidase 1... 30 9.2
AF213465-1|AAF71295.1| 1551|Homo sapiens dual oxidase protein. 30 9.2
>AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = -1
Query: 428 KLDPFDRKCSAAAGSVEVREAFDLTLGARDTVQLES------ECKIKSRKSSRLNIK*KS 267
KL F+R+C AGS R LT+GA+DT+ + + K S+ +K
Sbjct: 334 KLPSFERRCETPAGS--SRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITG 391
Query: 266 NLTINLPLYNTETYTLNRTSAA 201
+ ++ P T + N + AA
Sbjct: 392 EMVLSFPAGITRHFANNPSPAA 413
>AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = -1
Query: 428 KLDPFDRKCSAAAGSVEVREAFDLTLGARDTVQLES------ECKIKSRKSSRLNIK*KS 267
KL F+R+C AGS R LT+GA+DT+ + + K S+ +K
Sbjct: 334 KLPSFERRCETPAGS--SRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITG 391
Query: 266 NLTINLPLYNTETYTLNRTSAA 201
+ ++ P T + N + AA
Sbjct: 392 EMVLSFPAGITRHFANNPSPAA 413
>AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = -1
Query: 428 KLDPFDRKCSAAAGSVEVREAFDLTLGARDTVQLES------ECKIKSRKSSRLNIK*KS 267
KL F+R+C AGS R LT+GA+DT+ + + K S+ +K
Sbjct: 334 KLPSFERRCETPAGS--SRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCIVKITG 391
Query: 266 NLTINLPLYNTETYTLNRTSAA 201
+ ++ P T + N + AA
Sbjct: 392 EMVLSFPAGITRHFANNPSPAA 413
>AJ225682-1|CAA12563.1| 75|Homo sapiens Ig heavy chain variable
region protein.
Length = 75
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -1
Query: 119 RGPPGPACDWAGARIFRGS--YSKSI*SHVYIS 27
R PPG +W G+ +RGS YS S+ S + IS
Sbjct: 2 RQPPGKGLEWIGSIYYRGSAFYSPSLKSRITIS 34
>DQ100673-1|AAZ08680.1| 130|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 130
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -1
Query: 119 RGPPGPACDWAGARIFRGS--YSKSI*SHVYIS 27
R PPG +W G+ +RGS Y+ S+ S V IS
Sbjct: 40 RQPPGKGLEWIGSIYYRGSTYYNSSLKSRVTIS 72
>BC114938-1|AAI14939.1| 1551|Homo sapiens dual oxidase 1 protein.
Length = 1551
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 610 SSVDCRS*CVAIKNIWIFHTIRRIDYLLNIV*ECRE 503
SSV C+ C I IW+ T R+ ++L +I+ E E
Sbjct: 1406 SSVSCQVFCKKIYFIWVTRTQRQFEWLADIIREVEE 1441
>BC114628-1|AAI14629.1| 1551|Homo sapiens dual oxidase 1 protein.
Length = 1551
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 610 SSVDCRS*CVAIKNIWIFHTIRRIDYLLNIV*ECRE 503
SSV C+ C I IW+ T R+ ++L +I+ E E
Sbjct: 1406 SSVSCQVFCKKIYFIWVTRTQRQFEWLADIIREVEE 1441
>AK172859-1|BAD18816.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ24020 fis, clone LNG15868, highly similar to
Homo sapiens dual oxidase 1 (DUOX1). ).
Length = 456
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 610 SSVDCRS*CVAIKNIWIFHTIRRIDYLLNIV*ECRE 503
SSV C+ C I IW+ T R+ ++L +I+ E E
Sbjct: 311 SSVSCQVFCKKIYFIWVTRTQRQFEWLADIIREVEE 346
>AF230495-1|AAF73921.1| 1551|Homo sapiens NADPH thyroid oxidase 1
protein.
Length = 1551
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 610 SSVDCRS*CVAIKNIWIFHTIRRIDYLLNIV*ECRE 503
SSV C+ C I IW+ T R+ ++L +I+ E E
Sbjct: 1406 SSVSCQVFCKKIYFIWVTRTQRQFEWLADIIREVEE 1441
>AF213465-1|AAF71295.1| 1551|Homo sapiens dual oxidase protein.
Length = 1551
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 610 SSVDCRS*CVAIKNIWIFHTIRRIDYLLNIV*ECRE 503
SSV C+ C I IW+ T R+ ++L +I+ E E
Sbjct: 1406 SSVSCQVFCKKIYFIWVTRTQRQFEWLADIIREVEE 1441
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,733,505
Number of Sequences: 237096
Number of extensions: 2087860
Number of successful extensions: 6575
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6574
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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