Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0570
         (845 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical...    30   1.8  
AF040661-3|AAG24226.1|  187|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z46937-4|CAA87059.2|  221|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical
           protein C31B8.16 protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +1

Query: 499 ITLDILIQYLINSQCDV*YEISIYSLLQRIKIDNPLRSLLAARTASDTCWGRTARIRQ*L 678
           + L +  Q+LI  + DV   ISI ++   I   +P+ ++L+    +  CW R  RIR  +
Sbjct: 205 LPLSVFCQFLIEEETDVSVPISIANV---IFASSPIPAMLSFLWRNPACWSR--RIRNTV 259

Query: 679 VITL 690
            +TL
Sbjct: 260 NLTL 263


>AF040661-3|AAG24226.1|  187|Caenorhabditis elegans Hypothetical
           protein W10G11.1 protein.
          Length = 187

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = -1

Query: 521 CIRMSRVIFTRHVNITGFNMGNK*SSTNKVSKLDPFDRKCSAAAGSVEVR--EAFDLTLG 348
           C+    V      N  GFN+ NK S+T  +     F+R        +E +   A ++TL 
Sbjct: 32  CLESFHVFIELGDNAKGFNISNKTSTTKMIENCGKFNRCRRTLDCLIEQKFVYAVNITLM 91

Query: 347 ARDTVQLESE 318
             DTVQ  S+
Sbjct: 92  FCDTVQFFSK 101


>Z46937-4|CAA87059.2|  221|Caenorhabditis elegans Hypothetical
           protein F43C1.5 protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 491 RHVNITGFNMGNK*SSTNKVSKLDP 417
           RHV I G N  N   S NK  KL+P
Sbjct: 149 RHVKIPGKNSKNSKISVNKAKKLEP 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,390,167
Number of Sequences: 27780
Number of extensions: 341903
Number of successful extensions: 851
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)