Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0569
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   0.89 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   6.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 255 FELTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNK 371
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +1

Query: 457 ETRMTSKRRPSRPRMHWILLLQHEVYHGG*EAPGKDF*L*QAXHPR 594
           + + +S ++PS      +L L+H V H G ++P + +      HP+
Sbjct: 77  QNQPSSYKQPSSDMADVLLSLKHAVVHPG-QSPAEKYDQQHLYHPQ 121


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 521 SMKSTMEDEKLQGKISDSD 577
           S+ S  EDE+++ ++SD D
Sbjct: 18  SLLSKKEDEEVEHRLSDRD 36


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 442 RQRSTETRMTSKRRPSRPRMHWILL 516
           R+RST ++ T     +RPR   + L
Sbjct: 43  RKRSTSSQSTEGENDARPRASQVKL 67


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 249 EQVVIFGHSTLTLKYLDEYSGLV 181
           +QV  F HS  ++ +L E  GLV
Sbjct: 367 QQVKNFRHSVRSVFFLSEIFGLV 389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,819
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)