Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0569
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 152 2e-37
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 139 2e-33
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 137 8e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 121 5e-28
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 78 7e-15
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.75
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 30 1.3
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 30 1.3
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 30 1.3
SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_8849| Best HMM Match : F-box (HMM E-Value=0.86) 30 1.7
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_59386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 28 5.3
SB_8850| Best HMM Match : LIM (HMM E-Value=0.51) 28 5.3
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 28 5.3
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 28 7.0
SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09) 28 7.0
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_28298| Best HMM Match : IncA (HMM E-Value=0.32) 27 9.2
SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_1333| Best HMM Match : IncA (HMM E-Value=0.32) 27 9.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 152 bits (369), Expect = 2e-37
Identities = 70/85 (82%), Positives = 79/85 (92%)
Frame = +3
Query: 255 FELTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERM 434
FELTGIPPAP GVPQIEVTFDIDANGILNVSA++KST KENKITITNDKGRLSKE+IERM
Sbjct: 461 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 520
Query: 435 VNEAEKYRNEDDKQKETIQAKNALD 509
VNEA KY+ ED+KQ++ IQ KN+L+
Sbjct: 521 VNEASKYKEEDEKQRDRIQTKNSLE 545
Score = 125 bits (301), Expect = 3e-29
Identities = 61/84 (72%), Positives = 66/84 (78%)
Frame = +1
Query: 1 AVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTHPFTTYSD 180
AVQAAILHGDK + V+D GIETAGGVM+ LIKRN+TIPTKQT FTTYSD
Sbjct: 376 AVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSD 435
Query: 181 NQPGVLIQVFEGERAMTKDNNLLG 252
NQPGVLIQVFEGER+MT NNLLG
Sbjct: 436 NQPGVLIQVFEGERSMTAHNNLLG 459
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +2
Query: 509 SYCFSMKSTMEDEKLQGKISDSDKQXILDKCXATIQ 616
SY +SMKST+ED+K++ KIS+ DK+ ILDKC ++
Sbjct: 546 SYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLK 581
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 139 bits (336), Expect = 2e-33
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +3
Query: 255 FELTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERM 434
FEL+GIPPAP GVPQI+VTFD+D+NGILNVSA++KST KENKITITNDKGRLSKE+IERM
Sbjct: 553 FELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDIERM 612
Query: 435 VNEAEKYRNEDDKQKETIQAKNALD 509
V EAEK++ D+ +E IQ+KN+L+
Sbjct: 613 VKEAEKFKAADEAVRERIQSKNSLE 637
Score = 125 bits (302), Expect = 3e-29
Identities = 61/84 (72%), Positives = 65/84 (77%)
Frame = +1
Query: 1 AVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTHPFTTYSD 180
AVQAAILHGDKSE QD G+ETAGGVMT IKRNTTIPTKQT FTTYSD
Sbjct: 468 AVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSD 527
Query: 181 NQPGVLIQVFEGERAMTKDNNLLG 252
NQ VLIQV+EGER++TKDNNLLG
Sbjct: 528 NQTSVLIQVYEGERSLTKDNNLLG 551
Score = 48.8 bits (111), Expect = 3e-06
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +2
Query: 509 SYCFSMKSTMEDEKLQGKISDSDKQXILDKCXATI 613
SY FSMKSTMEDEK++ K+S+ +++ ++ +C AT+
Sbjct: 638 SYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATL 672
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 137 bits (331), Expect = 8e-33
Identities = 63/85 (74%), Positives = 75/85 (88%)
Frame = +3
Query: 255 FELTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERM 434
F+L+GIPPAP GVPQIEVTFDIDANGILNVSA +KST K ITITNDKGRLSKEEI+RM
Sbjct: 460 FDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEIDRM 519
Query: 435 VNEAEKYRNEDDKQKETIQAKNALD 509
+N+AEKY++ED+ Q+E I A+N L+
Sbjct: 520 INDAEKYKSEDEAQREKIAARNRLE 544
Score = 111 bits (266), Expect = 6e-25
Identities = 56/84 (66%), Positives = 61/84 (72%)
Frame = +1
Query: 1 AVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTHPFTTYSD 180
AVQAAIL GDKS+EV+D GIETAG VMT LI+RN IPTK T FTTYSD
Sbjct: 375 AVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMTKLIERNARIPTKATQTFTTYSD 434
Query: 181 NQPGVLIQVFEGERAMTKDNNLLG 252
NQP V I+VFEGER +TK NNLLG
Sbjct: 435 NQPAVTIRVFEGERPLTKHNNLLG 458
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 509 SYCFSMKSTMEDEKLQGKISDSDKQXILDK 598
SY F +KS + + L+GK+S SDK + +K
Sbjct: 545 SYAFGVKSAISEPSLEGKLSQSDKDTVKNK 574
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 121 bits (291), Expect = 5e-28
Identities = 55/85 (64%), Positives = 69/85 (81%)
Frame = +3
Query: 255 FELTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERM 434
F+L GIPPAP GVPQIEVTF+ID NGIL VSA +K T + KITITND+ RL+ E+IERM
Sbjct: 1154 FDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDIERM 1213
Query: 435 VNEAEKYRNEDDKQKETIQAKNALD 509
VN+AEK+ +ED K KE ++A+N L+
Sbjct: 1214 VNDAEKFADEDKKTKEKVEARNELE 1238
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/84 (54%), Positives = 55/84 (65%)
Frame = +1
Query: 1 AVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTHPFTTYSD 180
AVQA +L G+ E+ + GIET GGVMT LI RNT IPTK++ F+T +D
Sbjct: 1071 AVQAGVLGGE--EDTGEVVLLDVNPLTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAAD 1128
Query: 181 NQPGVLIQVFEGERAMTKDNNLLG 252
NQ V IQVFEGER MTKDN+ LG
Sbjct: 1129 NQNTVTIQVFEGERPMTKDNHPLG 1152
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 509 SYCFSMKSTMED-EKLQGKISDSDKQXILD 595
SY +S+K+ + D EKL GK+S+ DK+ I +
Sbjct: 1239 SYAYSLKNQVGDKEKLGGKLSEDDKKTITE 1268
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = +3
Query: 255 FELTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERM 434
F+L GIPPAP GVPQ+EVTFDIDANGI+NVSA +K T +E +I I G LSK+ IE M
Sbjct: 265 FQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLSKDAIENM 323
Query: 435 VNEAEKYRNEDDKQKETIQAKNAL 506
+ EAEKY E DKQK+ + K +
Sbjct: 324 IKEAEKYA-EADKQKKVEKLKEEI 346
Score = 77.8 bits (183), Expect = 7e-15
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = +1
Query: 1 AVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTHPFTTYSD 180
A+ AAI G + +V+D GIET GGV T LI RNTTIPTK++ F+T +D
Sbjct: 180 AIGAAIQGGVLAGDVKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAAD 239
Query: 181 NQPGVLIQVFEGERAMTKDNNLLG 252
Q V I+VF+GER M DN LLG
Sbjct: 240 GQTQVEIKVFQGEREMAIDNKLLG 263
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 77.8 bits (183), Expect = 7e-15
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = +1
Query: 1 AVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTHPFTTYSD 180
A+ AAI G + +V+D GIET GGV T LI RNTTIPTK++ F+T +D
Sbjct: 125 AIGAAIQGGVLAGDVKDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAAD 184
Query: 181 NQPGVLIQVFEGERAMTKDNNLLG 252
Q V I+VF+GER M DN LLG
Sbjct: 185 GQTQVEIKVFQGEREMAIDNKLLG 208
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 348 AIEKSTNKENKITITNDKGRLSKEEIER--MVNEAEKYRNEDDKQKETIQAKNA 503
A +K+T+K + ITN G++ KEE +R V E++K K++E I+ K A
Sbjct: 1132 AEQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQKAIEAARKKQEEIRQKQA 1185
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 308 HLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 415
H +H+ ++ Q+ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 354 EKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALD 509
+K+ + NKI + N+ + SKE++ER V AE + R+ D + K +++L+
Sbjct: 1031 DKTRRQLNKILVENENLKGSKEDLERRVVVAENRLRDTDSEMKGWRDIRSSLE 1083
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 297 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 476
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNEISDL 158
Query: 477 KETIQAKN 500
+ K+
Sbjct: 159 NSKLNTKS 166
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 396 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALD 509
++ + KEE ER+ EAE+ R ED++Q+ + + A D
Sbjct: 411 EEEKRQKEEEERLRVEAERQREEDERQRAEDERQRAED 448
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 297 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ 476
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNEISDL 158
Query: 477 KETIQAKN 500
+ K+
Sbjct: 159 NSKLNTKS 166
>SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 324 ANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 503
+ I+ EK N EN++ K KEE+ + E+++ +K K+ ++ KN
Sbjct: 165 SKSIIEKMKTEKK-NLENEVASLKLKQETIKEEVVEEIEGDEEFQKLQNKYKQVVEEKNT 223
Query: 504 L 506
L
Sbjct: 224 L 224
>SB_8849| Best HMM Match : F-box (HMM E-Value=0.86)
Length = 1222
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -3
Query: 141 DGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTVQDSSL 7
DG+V LDE + +++SL++ G C + ++ + + TV++SSL
Sbjct: 1160 DGAVLLDEWNYGSNASLSSCGSTC--SESRLSYFIGQDTVEESSL 1202
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 387 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNAL 506
+ +K RL EE+ER+ E +K E+ K++ET++ K L
Sbjct: 277 LEEEKKRL--EELERLKEEKDKMLEEELKKRETLEEKQKL 314
>SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 351 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 473
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 66 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 106
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 351 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 473
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 78 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 118
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 351 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 473
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 90 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 130
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 351 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 473
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 102 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 142
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 351 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 473
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 114 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 154
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 351 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 473
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 126 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 166
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 396 DKGRLSKEEIERMVNEAEKYRNEDDKQKE 482
DK +L KEE E+ + E NE KQKE
Sbjct: 1606 DKYQLEKEEAEKRLQSYEDELNEKQKQKE 1634
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 1 AVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTIPTKQTHPFTTYSD 180
AVQA+IL G K ++ + M +I + P ++ H FTT +D
Sbjct: 83 AVQASILMGRKEADMITEIETMSKAICVSVGGESSRMIPVIPQYCPYPLRRAHTFTTATD 142
Query: 181 NQ 186
+Q
Sbjct: 143 DQ 144
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 342 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK---YRNEDDKQKETIQAK 497
V IEK + K I + KEEIE ++ EK EDD +KE I +
Sbjct: 145 VEEIEKREDANEKEEIEEREDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDER 199
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 320 RCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 424
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 414 KEEIERMVNEAEKYRNEDDKQKETIQ-AKNALDLT 515
KE E +NE +KY N+ K +Q KNALD T
Sbjct: 811 KERSEAWLNEKQKYTNDIKHIKTEVQLCKNALDGT 845
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 326 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 427
QR QR R R+ H+Q ++ QRQR + R R
Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 339 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ-AKNALD 509
NV A+E+S K + ++ + E+I+ + EAE+ E ++ E +Q KNAL+
Sbjct: 1268 NVKAVEESNEKITSLKALINQKDDALEKIKASLKEAEERFQELNRTLEEVQKEKNALE 1325
>SB_59386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1037
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 390 TNDKGRLSKEEIERMVNEAEKY-RNEDDKQKETIQAKNALDLTAS 521
TND G S +E E VN ++K NE++ + E ++ +N+++ S
Sbjct: 888 TNDNGS-STDEAESEVNNSDKEGENEENDEVEDMEVENSIECKLS 931
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 339 NVSAIEKSTNKENKITITNDKGRLSKE-EIERMVN---EAEKYRNEDDKQKET 485
N+ + EK+ +K+ +TN++ SKE ++ N E + +N DD+Q++T
Sbjct: 46 NLDSEEKTEDKQTASDLTNEENAESKEITADQPTNNELETDNAQNVDDQQQQT 98
>SB_8850| Best HMM Match : LIM (HMM E-Value=0.51)
Length = 1039
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = +1
Query: 91 ETAGGVMTTLIKRNTTIPTKQTHPFTTYSDNQPGVLIQVFEGERAMTKDNNLLGNSS*PG 270
+ GG L N IP +T P+ Y N V+E + +D N L P
Sbjct: 108 DNCGGKDVRLNAENKYIPEIRTWPYRKYLLNAVACRTCVYEKLESKVEDMNALQTKPAPA 167
Query: 271 SH 276
SH
Sbjct: 168 SH 169
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 28.3 bits (60), Expect = 5.3
Identities = 25/94 (26%), Positives = 38/94 (40%)
Frame = +2
Query: 134 LPSPLNRLIHSPPTLITNPEYSSKYLRVSVL*PKITTCSVIRADRDPTGAXWRASN*GHL 313
+P L +IH P PEY + + + I C R G WR N GH+
Sbjct: 198 IPQNLVGVIHEYPRGAI-PEYPGGVIPENPV-GAIPECPGNNRGRGGRGR-WRRQNHGHI 254
Query: 314 RHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 415
+ R Q P +Y+ + + + H QR L+
Sbjct: 255 QSRTQVQPSSQQYKTLPSE-QSSPHKMSQREPLK 287
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 338 QRFRYREVHQQGEQD-HHYQRQRSSLQGRDRAYG**GREVQKRG*QAKGDHPG 493
+R+R R+V Q+GE++ H+Q + + D R+V +RG + + HPG
Sbjct: 200 RRYRTRQVSQRGERERRHHQEWQYAATVLD-------RQVSERGKRERRHHPG 245
>SB_12881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 506 GSYCFSMKSTMEDEKLQGKISDSDKQXILDKCXAT 610
GS + +S EDEK+ SDS+ LD C T
Sbjct: 250 GSLFNTSRSASEDEKISLHFSDSEGSSSLDHCSLT 284
>SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09)
Length = 265
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 396 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 503
+K R +EE +++ + +K+ ++ K+ E ++ KNA
Sbjct: 50 EKERKEREEEDKLWEDDDKHEQQEKKRLEALERKNA 85
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 348 AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 479
A + + ++ +K T N RLS + ER E KY + D+ K
Sbjct: 619 AQDNTRSRTHKFTPKNKLKRLSGIKTERQKTERHKYHKKPDRDK 662
>SB_28298| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 225
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 261 LTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 440
L G+ A GV +T + + V A K + ++ GR+S EE ++
Sbjct: 112 LVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEEFRLILQ 171
Query: 441 EAEKYR 458
E E+Y+
Sbjct: 172 EQERYK 177
>SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 291 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRL 410
VP+I + D + I V + ++ +NKI ND+G++
Sbjct: 62 VPEITESIDFASGSIREVPSSTENKGNKNKILEKNDQGKM 101
>SB_1333| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 302
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 261 LTGIPPAPXGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN 440
L G+ A GV +T + + V A K + ++ GR+S EE ++
Sbjct: 189 LVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEEFRLILQ 248
Query: 441 EAEKYR 458
E E+Y+
Sbjct: 249 EQERYK 254
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,436,309
Number of Sequences: 59808
Number of extensions: 352041
Number of successful extensions: 1522
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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