Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0567
(428 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 30 0.61
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 30 0.61
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 30 0.61
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 30 0.61
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 3.3
AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical ... 28 3.3
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 27 5.7
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 27 5.7
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 27 7.5
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 26 10.0
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 26 10.0
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 30.3 bits (65), Expect = 0.61
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 139 TCVSQNTGTCPESSCACPETSCACPETSCACP 234
TC G E SC C + SC+ C CP
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCP 620
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 30.3 bits (65), Expect = 0.61
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 139 TCVSQNTGTCPESSCACPETSCACPETSCACP 234
TC G E SC C + SC+ C CP
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCP 620
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 30.3 bits (65), Expect = 0.61
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 139 TCVSQNTGTCPESSCACPETSCACPETSCACP 234
TC G E SC C + SC+ C CP
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCP 620
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 30.3 bits (65), Expect = 0.61
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 139 TCVSQNTGTCPESSCACPETSCACPETSCACP 234
TC G E SC C + SC+ C CP
Sbjct: 589 TCSKGKYGESCELSCPCSDASCSKQTGKCLCP 620
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = +1
Query: 139 TCVSQNTGTCPESSCACPETSCA----CPETSCACP 234
TCVS NT + P C T C C + C CP
Sbjct: 1475 TCVSINTYSSPGDPCDLTNTICTGNSQCIDGICKCP 1510
>AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical
protein C09D4.2 protein.
Length = 254
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 145 VSQNTGTCPESSCACPETSCAC 210
+S TG+ E+ CAC +CAC
Sbjct: 126 LSLRTGSSNENGCACVHGNCAC 147
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 178 SCACPETSCACPETSCACPE 237
+C E SC+C C+CPE
Sbjct: 99 ACDDSECSCSCSGGECSCPE 118
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 178 SCACPETSCACPETSCACPE 237
+C E SC+C C+CPE
Sbjct: 225 ACDDSECSCSCSGGECSCPE 244
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 169 PESSCACPETSCACPETSCACPEXSLCPE 255
P++ CA P C P C CP CP+
Sbjct: 642 PQNCCA-PPAPCCLPTIPC-CPPIPCCPQ 668
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 169 PESSCACPETSCACPETSCACPEXSLCPE 255
P++ CA P C P C CP CP+
Sbjct: 287 PQNCCA-PPAPCCLPTIPC-CPPIPCCPQ 313
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 169 PESSCACPETSCACPETSCACPEXSLCPE 255
P++ CA P C P C CP CP+
Sbjct: 239 PQNCCA-PPAPCCLPTIPC-CPPIPCCPQ 265
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 169 PESSCACPETSCACPETSCACPEXSLCPE 255
P++ CA P C P C CP CP+
Sbjct: 967 PQNCCA-PPAPCCLPTIPC-CPPIPCCPQ 993
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 124 CKLY*TCVSQNTGTCPESSCACPETSCACPETSCAC 231
CKL C GT PE+SC CP +S C
Sbjct: 586 CKLNIHCPD---GTVPETSCQSASNHDHCPSSSHKC 618
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +1
Query: 142 CVSQNTGT--CPESSCACPETSCACP 213
C TGT C S C P TSC P
Sbjct: 1322 CSGAYTGTQACANSVCLFPRTSCCAP 1347
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,548,503
Number of Sequences: 27780
Number of extensions: 32378
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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