Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0565
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.1  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   6.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.1  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 329 ADSSDSPTPHHATIYDQSYQTRELSVICWAIVDRTPL 219
           A+  + P P     YD  YQT +  ++ + I+   P+
Sbjct: 32  ANPDEEPDPELLDRYDNFYQTTKSLLVLFQIMGVMPI 68


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -2

Query: 329 ADSSDSPTPHHATIYDQSYQTRELSVICWAIVDRTPL 219
           A+  + P P     YD  YQT +  ++ + I+   P+
Sbjct: 32  ANPDEEPDPELLDRYDNFYQTTKSLLVLFQIMGVMPI 68


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +1

Query: 106 SRQH-HRHRYTDARHMSAVGGRYGTVARG*VL*KREGCRRGVLST 237
           S +H H+H++  A      GGR      G V   R GC R   +T
Sbjct: 20  SAEHPHQHQHYGAAVQVPQGGRRRAARPGVVTTPRWGCARASSAT 64


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 47  AFLTLFIAFWTGVVGCWKRSPGNITATAI--LMLVTCLLSAGAMALWHGVE 193
           A LT  + F  GVV  + R P +I       L + +    A +  +W  VE
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINENLKMGLDIASITAQASSFVVWPLVE 238


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 47  AFLTLFIAFWTGVVGCWKRSPGNITATAI--LMLVTCLLSAGAMALWHGVE 193
           A LT  + F  GVV  + R P +I       L + +    A +  +W  VE
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINENLKMGLDIASITAQASSFVVWPLVE 238


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 404 SCRYTHKSSSTLTPDTRRPRGNPGPYYH 487
           SCRYT   ++ +TP         G ++H
Sbjct: 50  SCRYTAGLAANVTPADSMVNYTLGQHHH 77


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 404 SCRYTHKSSSTLTPDTRRPRGNPGPYYH 487
           SCRYT   ++ +TP         G ++H
Sbjct: 109 SCRYTAGLAANVTPADSMVNYTLGQHHH 136


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 404 SCRYTHKSSSTLTPDTRRPRGNPGPYYH 487
           SCRYT   ++ +TP         G ++H
Sbjct: 50  SCRYTAGLAANVTPADSMVNYTLGQHHH 77


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 404 SCRYTHKSSSTLTPDTRRPRGNPGPYYH 487
           SCRYT   ++ +TP         G ++H
Sbjct: 109 SCRYTAGLAANVTPADSMVNYTLGQHHH 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,137
Number of Sequences: 336
Number of extensions: 1756
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)