Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0562
(606 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 107 3e-22
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 104 1e-21
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 89 6e-17
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 89 1e-16
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 87 2e-16
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 86 5e-16
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 86 7e-16
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 85 9e-16
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 85 9e-16
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 83 7e-15
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 81 2e-14
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 81 2e-14
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 78 1e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 73 4e-12
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 69 9e-11
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 66 5e-10
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 62 1e-08
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 56 9e-07
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 52 1e-05
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 52 1e-05
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 49 7e-05
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 48 2e-04
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 47 4e-04
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 44 0.002
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 41 0.020
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.18
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 38 0.24
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 37 0.32
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 37 0.43
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 37 0.43
UniRef50_A6FXV5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_P59020 Cluster: Down syndrome critical region protein 9... 35 1.3
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 35 1.7
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 34 2.3
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 34 3.0
UniRef50_UPI0000D557E8 Cluster: PREDICTED: similar to CG31198-PA... 32 9.2
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 107 bits (256), Expect = 3e-22
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 104 bits (250), Expect = 1e-21
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK +RRWH + V LVQ+ G
Sbjct: 85 GGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKG 144
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H+I+ + E PLVV+D+VQ++ KTK
Sbjct: 145 HVIDGVSEFPLVVSDEVQKVQKTK 168
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +1
Query: 4 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKE 183
MSL ARPLVSVY+EK+E + LP VFKAPIRP +VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 184 AGHQTSAESWGT 219
AGHQTSAESWGT
Sbjct: 61 AGHQTSAESWGT 72
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2
Query: 494 QQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
Q+ + AVIFLRRLK W+DI KVYKSQ RA +G MR+
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRD 201
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 89.4 bits (212), Expect = 6e-17
Identities = 43/84 (51%), Positives = 49/84 (58%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGT SG GAFGNMCRGGRMFAPTK +RRWH + V LV + G
Sbjct: 81 GGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRG 140
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H I +PE+PLVV D +Q KTK
Sbjct: 141 HQIGNVPEVPLVVEDSIQGYEKTK 164
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = +1
Query: 19 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQT 198
ARP VSVYS S++V G PLP VF APIR +V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 199 SAESWGT 219
SA SWGT
Sbjct: 62 SAHSWGT 68
Score = 33.1 bits (72), Expect = 5.2
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + A+ FL+ + A D+ +V S+ +RA +GKMRN
Sbjct: 159 GYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRN 197
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/82 (50%), Positives = 50/82 (60%)
Frame = +3
Query: 258 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGH 437
GT RSGQGAFGNMCRGG MF+P K +RR+H T LV A GH
Sbjct: 84 GTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGH 143
Query: 438 IIEKIPELPLVVADKVQEINKT 503
I +PELPLV+++++Q INKT
Sbjct: 144 RINNVPELPLVISNEIQNINKT 165
Score = 76.2 bits (179), Expect = 6e-13
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARP+VSV+ T ++ PLP VF +P+R LV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 190 HQTSAESWGT 219
HQ SAESWGT
Sbjct: 61 HQHSAESWGT 70
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 87.4 bits (207), Expect = 2e-16
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHR+GQ A+ N CR G M+APT+ WRRWH T V +V + G
Sbjct: 81 GGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRG 140
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE + E+P+VV D +++INKTK
Sbjct: 141 HRIEALREVPMVVDDAIEQINKTK 164
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/66 (54%), Positives = 43/66 (65%)
Frame = +1
Query: 22 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTS 201
RP VSV++ GA +P VF AP+R LV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 202 AESWGT 219
A SWGT
Sbjct: 63 ARSWGT 68
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 86.2 bits (204), Expect = 5e-16
Identities = 39/82 (47%), Positives = 46/82 (56%)
Frame = +3
Query: 258 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGH 437
GTHRSGQ AFGN CR GRM P K WRRWH T + LV A GH
Sbjct: 84 GTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGH 143
Query: 438 IIEKIPELPLVVADKVQEINKT 503
I ++P++PLVV DK++ KT
Sbjct: 144 RISQVPQIPLVVEDKIESYEKT 165
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 25 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTS 201
PLVSV+S T V PLP VF+ PIRP +V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 202 AESWGT 219
AESWGT
Sbjct: 65 AESWGT 70
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 85.8 bits (203), Expect = 7e-16
Identities = 41/67 (61%), Positives = 47/67 (70%)
Frame = +1
Query: 19 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQT 198
+RP VSV S T G PLP VF +PIRP +V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 199 SAESWGT 219
SAESWGT
Sbjct: 62 SAESWGT 68
Score = 83.4 bits (197), Expect = 4e-15
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHR+GQ AFGNMCR GRMFAPTK WR+WH + V L+ A G
Sbjct: 81 GGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARG 140
Query: 435 HIIEKIPELPLVVADKVQE 491
H I ++ E+PLV+ +V E
Sbjct: 141 HQISEVAEVPLVINSEVFE 159
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 85.4 bits (202), Expect = 9e-16
Identities = 39/86 (45%), Positives = 49/86 (56%)
Frame = +3
Query: 249 PWGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQA 428
P GGTHR+GQ AFGNMCRGG MF PTK WRRW + + LV A
Sbjct: 80 PGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLA 139
Query: 429 XGHIIEKIPELPLVVADKVQEINKTK 506
GH I + E+PLV ++ ++ + KTK
Sbjct: 140 RGHRISNLKEVPLVASNDIESMQKTK 165
Score = 66.9 bits (156), Expect = 3e-10
Identities = 32/70 (45%), Positives = 44/70 (62%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ RPL +VY + V G + +P VF+ PIR L+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 190 HQTSAESWGT 219
++TSAESWGT
Sbjct: 60 YETSAESWGT 69
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 85.4 bits (202), Expect = 9e-16
Identities = 37/84 (44%), Positives = 47/84 (55%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQ A+ N CR G MFAPT+ WR WH T LV + G
Sbjct: 81 GGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRG 140
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H +E +PELPLV+ D ++ + KT+
Sbjct: 141 HRVESVPELPLVLDDTMETLTKTR 164
Score = 72.5 bits (170), Expect = 7e-12
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +1
Query: 16 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQ 195
V RP+VSV+S +E G+ +P VF P+R LV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 196 TSAESWGT 219
TSA SWGT
Sbjct: 61 TSARSWGT 68
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 82.6 bits (195), Expect = 7e-15
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHR+GQ AFGNMCR GRMFAPTK WR+WH + L+ A G
Sbjct: 58 GGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQKRFATASALAASGSPALLMARG 117
Query: 435 HIIEKIPELPLVVA 476
H + +PE+PLV++
Sbjct: 118 HNVSTVPEVPLVIS 131
Score = 33.5 bits (73), Expect = 4.0
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 148 KNSRQPYCVSKEAGHQTSAESWGT 219
++++ V +AGHQTSAESWGT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGT 45
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 81.4 bits (192), Expect = 2e-14
Identities = 33/86 (38%), Positives = 49/86 (56%)
Frame = +3
Query: 249 PWGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQA 428
P GTHRSGQGA N CRGGR+F PT WR+WH + + ++ +
Sbjct: 75 PGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVS 134
Query: 429 XGHIIEKIPELPLVVADKVQEINKTK 506
G+ ++ IPE+P V+ D +++I KT+
Sbjct: 135 RGYRVKTIPEIPFVIEDSIEKIPKTR 160
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +1
Query: 82 LPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 219
+P VF + IR +V VH +M KN RQ Y VS AG TSA SWGT
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGT 64
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +3
Query: 258 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGH 437
GT R+GQ AF N RGG M++P K WRRWH + LV A GH
Sbjct: 83 GTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGH 142
Query: 438 IIEKIPELPLVVADKVQEINKTK 506
I+ +PELPLVV+D V++I KTK
Sbjct: 143 KIDNVPELPLVVSDDVEQIKKTK 165
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +1
Query: 28 LVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 207
L +VY+ + A P + +PIRP +V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 208 SWGT 219
SWGT
Sbjct: 66 SWGT 69
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/61 (60%), Positives = 45/61 (73%)
Frame = +1
Query: 37 VYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 216
VY++KSE + LP VF+AP+RP +V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 217 T 219
T
Sbjct: 186 T 186
Score = 72.1 bits (169), Expect = 9e-12
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 347
GGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 199 GGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/83 (40%), Positives = 46/83 (55%)
Frame = +3
Query: 258 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGH 437
G++R+GQGA+ N CRGG F P RRW T V LVQA GH
Sbjct: 80 GSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGH 139
Query: 438 IIEKIPELPLVVADKVQEINKTK 506
++ ++ E+P+VV D VQEI +T+
Sbjct: 140 VLGEVKEVPIVVVDAVQEIKRTR 162
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/68 (36%), Positives = 44/68 (64%)
Frame = +1
Query: 16 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQ 195
++R V+V +++ + + + LP VF PIR +V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 196 TSAESWGT 219
SA SWGT
Sbjct: 59 VSAISWGT 66
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 68.9 bits (161), Expect = 9e-11
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGT R+GQGAF N CR GRM PTK RRW + LV+A G
Sbjct: 79 GGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARG 138
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H I + LP++V+D + + KTK
Sbjct: 139 HRISDVKMLPIIVSDDIAKARKTK 162
Score = 52.4 bits (120), Expect = 8e-06
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +1
Query: 31 VSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 210
++ Y TV+ LP VF PIR LV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 211 WGT 219
WGT
Sbjct: 64 WGT 66
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGH 437
G+ R+GQGAFGNM R G MF+P K +R+W + V LV A GH
Sbjct: 83 GSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGH 142
Query: 438 IIEKIPELPLVVADK-VQEINKTK 506
I +P++PLVV K + I KTK
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTK 166
Score = 58.8 bits (136), Expect = 9e-08
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 19 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQT 198
+RP V++Y + + LP VF APIR +V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 199 SAESWGT 219
SA SWGT
Sbjct: 63 SAISWGT 69
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 509 AVIFLRRLKAWSDILKVYKSQXLRAXKGKMR 601
AV L+++ A+SD+LKV S+ +RA +GKMR
Sbjct: 168 AVYLLKKINAYSDVLKVIASKTVRAGQGKMR 198
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +2
Query: 509 AVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
AVIFLRR+KAWSD+LKVYKSQ LRA KGKMRN
Sbjct: 32 AVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRN 63
Score = 41.9 bits (94), Expect = 0.011
Identities = 15/25 (60%), Positives = 23/25 (92%)
Frame = +3
Query: 432 GHIIEKIPELPLVVADKVQEINKTK 506
G++++ + E+PLVV+DK+QEINKTK
Sbjct: 6 GYVVDNVSEIPLVVSDKIQEINKTK 30
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 55.6 bits (128), Expect = 9e-07
Identities = 28/64 (43%), Positives = 35/64 (54%)
Frame = +1
Query: 25 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 204
P V V+ V A P P VF P+RP ++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 205 ESWG 216
SWG
Sbjct: 61 HSWG 64
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/78 (34%), Positives = 33/78 (42%)
Frame = +3
Query: 273 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGHIIEKI 452
G GA+ N RGG M PT RRW + LV+A GH I +
Sbjct: 78 GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIADV 137
Query: 453 PELPLVVADKVQEINKTK 506
P +PLVV + KTK
Sbjct: 138 PSIPLVV--DTDNVTKTK 153
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 118 LVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 219
+VN VH ++ KN QPY VS+ AG+QTSAESWGT
Sbjct: 26 VVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGT 59
Score = 49.6 bits (113), Expect = 6e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + V+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 101 GYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 139
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 23 GYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 432 GHIIEKIPELPLVVADKVQEINKTK 506
GH I ++PELPLVV DKV+ KT+
Sbjct: 4 GHRIGEVPELPLVVEDKVEGYKKTE 28
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 49.2 bits (112), Expect = 7e-05
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +3
Query: 258 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGH 437
GT ++GQGA NMCRGGR+F ++W+ T LV + GH
Sbjct: 84 GTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKVKVSAFKTALLSTLFETLVVSRGH 143
Query: 438 IIEKIPELPLVV 473
++ + P+++
Sbjct: 144 SLKDVKNFPMII 155
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 25 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 204
P+ ++ E+ +TV+ LP F+ P+R L+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 205 ESWG 216
ESWG
Sbjct: 59 ESWG 62
Score = 37.5 bits (83), Expect = 0.24
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 303 GGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGHIIEKIPELPLVVADK 482
G + APT P + W T V+ GH+I+ +P LP+VV D+
Sbjct: 93 GQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDE 151
Query: 483 VQEINKTK 506
++ +NK +
Sbjct: 152 LKSLNKAR 159
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 46.8 bits (106), Expect = 4e-04
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +3
Query: 276 QGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGHIIEKIP 455
+G F RGGR P K ++ H T V A GH++EK+P
Sbjct: 106 RGCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKVP 165
Query: 456 ELPLVVADKVQEINKTK 506
LP+VV ++IN+ K
Sbjct: 166 SLPVVVVGDAEKINRAK 182
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +3
Query: 333 WRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGHIIEKIPELPLVVADKVQEINKT 503
WRRWH + V L+ A GH +E +PE+PLVV D I KT
Sbjct: 111 WRRWHRRVNIKEKRYAVCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKT 167
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 509 AVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
AV L++L A++DI KV S+ +R+ KGKMRN
Sbjct: 170 AVELLKQLGAYADIEKVKASRNVRSGKGKMRN 201
Score = 33.1 bits (72), Expect = 5.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 67 GAAKPLPFVFKAPIRPXLVNDVHVSMSKN 153
GA+ +P VF +PIR +VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.1 bits (92), Expect = 0.020
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2
Query: 257 WYP*VRSGCLR*HVSWWTYVRXXEALAALAPSRQP 361
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.18
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 325 VGANIRPPRHMLPKAP*P 272
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 37.5 bits (83), Expect = 0.24
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +1
Query: 82 LPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 216
LP +F P+R L+ V ++ +S QP AG +TSAES+G
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFG 69
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 37.1 bits (82), Expect = 0.32
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 31 VSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 210
++VYS K + + LP +F+ RP ++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 211 WGT 219
+G+
Sbjct: 62 FGS 64
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 36.7 bits (81), Expect = 0.43
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 426 AXGHIIEKIPELPLVVADKVQEINKT 503
A GH IE +PELPLV+ D + + KT
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKT 27
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 36.7 bits (81), Expect = 0.43
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 408 VXXLVQAXGHIIEKIPELPLVVADKVQEINKT 503
V LV A GH IE + ELPLV+ D + ++KT
Sbjct: 18 VLSLVMARGHRIESVLELPLVIGDSTKSVDKT 49
>UniRef50_A6FXV5 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 342
Score = 35.1 bits (77), Expect = 1.3
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +3
Query: 147 QELEAALLREQGGWSPNQCRIMGYRTCCC----PXSAXPWGGTHRSGQGA 284
+EL AALL G SP C R CC S PW R+G+G+
Sbjct: 261 EELTAALLAFANGSSPGDCLTASTRPCCASRAGTRSPTPWACRRRTGRGS 310
>UniRef50_P59020 Cluster: Down syndrome critical region protein 9;
n=4; Homo/Pan/Gorilla group|Rep: Down syndrome critical
region protein 9 - Homo sapiens (Human)
Length = 149
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 186 WSPNQCRIMGYRTC-CCPXSAXPWGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 347
WSP+ R YR C +A WG T R G+GA G R AP W R H
Sbjct: 39 WSPDPGRPAAYRRAHVCDVTAPRWGSTSRQGEGAVLQRMLGRR--APPS-WSRDH 90
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 82 LPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGT 219
LP VF+ P+R L+ + N +Q Y + AG +T AES+G+
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGS 63
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 34.3 bits (75), Expect = 2.3
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 303 GGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXGHIIEKIPELPLVVADK 482
GGR P KP R+W T LV+ H+ E ELP VV+++
Sbjct: 87 GGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFE--GELPKVVSNE 144
Query: 483 VQEINKTK 506
++ + +TK
Sbjct: 145 LESVKRTK 152
Score = 33.1 bits (72), Expect = 5.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 82 LPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 216
LP VF RP ++ +++ + RQPY + +G S E+WG
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWG 62
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2
Query: 398 SNGCCQGRSPLSEVDATVPAPPGL 327
S+G C G SPLS A PAPPGL
Sbjct: 116 SSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_UPI0000D557E8 Cluster: PREDICTED: similar to CG31198-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG31198-PA - Tribolium castaneum
Length = 1591
Score = 32.3 bits (70), Expect = 9.2
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 461 SLGCSRQSPGDQQDQIAVIFLRRLKAWSDIL 553
+LGCS+ G + +A+IFLRR + +SDIL
Sbjct: 1556 ALGCSKNENGLDKYFVALIFLRRYENFSDIL 1586
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,447,396
Number of Sequences: 1657284
Number of extensions: 9507201
Number of successful extensions: 25589
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 24717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25561
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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