Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0562
(606 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 107 4e-23
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 107 4e-23
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 107 4e-23
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 106 7e-23
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 105 9e-23
BC066653-1|AAH66653.1| 149|Homo sapiens Down syndrome critical ... 35 0.19
AB066100-1|BAC07549.1| 149|Homo sapiens protein ( Homo sapiens ... 35 0.19
BC029827-1|AAH29827.2| 149|Homo sapiens Down syndrome critical ... 35 0.26
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 34 0.45
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 96 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 155
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 156 HRIEEVPELPLVVEDKVEGYKKTK 179
Score = 97.5 bits (232), Expect = 3e-20
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = +1
Query: 7 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEA 186
+++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 187 GHQTSAESWGT 219
GHQTSAESWGT
Sbjct: 73 GHQTSAESWGT 83
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 174 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 212
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 107 bits (256), Expect = 4e-23
Identities = 49/84 (58%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 106 bits (254), Expect = 7e-23
Identities = 49/84 (58%), Positives = 54/84 (64%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMPKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE++PELPLVV DKV+ KTK
Sbjct: 142 HRIEEVPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++ ARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQTSAESWGT
Sbjct: 60 HQTSAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 105 bits (253), Expect = 9e-23
Identities = 49/84 (58%), Positives = 54/84 (64%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK WRRWH + + LV + G
Sbjct: 82 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKG 141
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H IE+ PELPLVV DKV+ KTK
Sbjct: 142 HRIEEFPELPLVVEDKVEGYKKTK 165
Score = 97.1 bits (231), Expect = 4e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 10 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKEAG 189
++VARPL+SVYSEK E+ G LP VFKAPIRP +VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 190 HQTSAESWGT 219
HQT AESWGT
Sbjct: 60 HQTRAESWGT 69
Score = 51.6 bits (118), Expect = 2e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 488 GDQQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
G ++ + AV+ L++LKAW+DI KVY SQ +RA KGKMRN
Sbjct: 160 GYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198
>BC066653-1|AAH66653.1| 149|Homo sapiens Down syndrome critical
region gene 9 protein.
Length = 149
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 186 WSPNQCRIMGYRTC-CCPXSAXPWGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 347
WSP+ R YR C +A WG T R G+GA G R AP W R H
Sbjct: 39 WSPDPGRPAAYRRAHVCDVTAPRWGSTSRQGEGAVLQRMLGRR--APPS-WSRDH 90
>AB066100-1|BAC07549.1| 149|Homo sapiens protein ( Homo sapiens
mRNA, complete cds. ).
Length = 149
Score = 35.1 bits (77), Expect = 0.19
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 186 WSPNQCRIMGYRTC-CCPXSAXPWGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 347
WSP+ R YR C +A WG T R G+GA G R AP W R H
Sbjct: 39 WSPDPGRPAAYRRAHVCDVTAPRWGSTSRQGEGAVLQRMLGRR--APPS-WSRDH 90
>BC029827-1|AAH29827.2| 149|Homo sapiens Down syndrome critical
region gene 9 protein.
Length = 149
Score = 34.7 bits (76), Expect = 0.26
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 186 WSPNQCRIMGYRTC-CCPXSAXPWGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 341
WSP+ R YR C +A WG T R G+GA + G R AP W R
Sbjct: 39 WSPDPGRPAAYRRAHVCDVTAPRWGSTSRQGEGAVLQLMLGRR--APPS-WSR 88
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 33.9 bits (74), Expect = 0.45
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2
Query: 398 SNGCCQGRSPLSEVDATVPAPPGL 327
S+G C G SPLS A PAPPGL
Sbjct: 116 SSGLCGGNSPLSGNGAVCPAPPGL 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,529,799
Number of Sequences: 237096
Number of extensions: 1529343
Number of successful extensions: 3578
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3550
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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