Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0562
(606 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 104 8e-23
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 104 8e-23
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 104 8e-23
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 104 8e-23
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 104 8e-23
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 30 2.8
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 30 2.8
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 29 3.7
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 29 3.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 104 bits (250), Expect = 8e-23
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK +RRWH + V LVQ+ G
Sbjct: 85 GGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKG 144
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H+I+ + E PLVV+D+VQ++ KTK
Sbjct: 145 HVIDGVSEFPLVVSDEVQKVQKTK 168
Score = 95.1 bits (226), Expect = 7e-20
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +1
Query: 4 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKE 183
MSL ARPLVSVY+EK+E + LP VFKAPIRP +VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 184 AGHQTSAESWGT 219
AGHQTSAESWGT
Sbjct: 61 AGHQTSAESWGT 72
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2
Query: 494 QQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
Q+ + AVIFLRRLK W+DI KVYKSQ RA +G MR+
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRD 201
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 104 bits (250), Expect = 8e-23
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK +RRWH + V LVQ+ G
Sbjct: 23 GGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQRRYALVSAIAASGVPALVQSKG 82
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H+I+ + E PLVV+D+VQ++ KTK
Sbjct: 83 HVIDGVSEFPLVVSDEVQKVQKTK 106
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 494 QQDQIAVIFLRRLKAWSDILK 556
Q+ + AVIFLRRLK W+DI K
Sbjct: 103 QKTKQAVIFLRRLKIWADIQK 123
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 104 bits (250), Expect = 8e-23
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK +RRWH + V LVQ+ G
Sbjct: 85 GGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKG 144
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H+I+ + E PLVV+D+VQ++ KTK
Sbjct: 145 HVIDGVSEFPLVVSDEVQKVQKTK 168
Score = 95.1 bits (226), Expect = 7e-20
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +1
Query: 4 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKE 183
MSL ARPLVSVY+EK+E + LP VFKAPIRP +VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 184 AGHQTSAESWGT 219
AGHQTSAESWGT
Sbjct: 61 AGHQTSAESWGT 72
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2
Query: 494 QQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
Q+ + AVIFLRRLK W+DI KVYKSQ RA +G MR+
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRD 201
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 104 bits (250), Expect = 8e-23
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK +RRWH + V LVQ+ G
Sbjct: 85 GGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKG 144
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H+I+ + E PLVV+D+VQ++ KTK
Sbjct: 145 HVIDGVSEFPLVVSDEVQKVQKTK 168
Score = 95.1 bits (226), Expect = 7e-20
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +1
Query: 4 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKE 183
MSL ARPLVSVY+EK+E + LP VFKAPIRP +VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 184 AGHQTSAESWGT 219
AGHQTSAESWGT
Sbjct: 61 AGHQTSAESWGT 72
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2
Query: 494 QQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
Q+ + AVIFLRRLK W+DI KVYKSQ RA +G MR+
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRD 201
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 104 bits (250), Expect = 8e-23
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +3
Query: 255 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXTXVXXLVQAXG 434
GGTHRSGQGAFGNMCRGGRMFAPTK +RRWH + V LVQ+ G
Sbjct: 85 GGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKG 144
Query: 435 HIIEKIPELPLVVADKVQEINKTK 506
H+I+ + E PLVV+D+VQ++ KTK
Sbjct: 145 HVIDGVSEFPLVVSDEVQKVQKTK 168
Score = 95.1 bits (226), Expect = 7e-20
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +1
Query: 4 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPXLVNDVHVSMSKNSRQPYCVSKE 183
MSL ARPLVSVY+EK+E + LP VFKAPIRP +VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 184 AGHQTSAESWGT 219
AGHQTSAESWGT
Sbjct: 61 AGHQTSAESWGT 72
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2
Query: 494 QQDQIAVIFLRRLKAWSDILKVYKSQXLRAXKGKMRN 604
Q+ + AVIFLRRLK W+DI KVYKSQ RA +G MR+
Sbjct: 165 QKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRD 201
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 9 SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSGPG 122
++GSP ++VG G G S APP + AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 9 SIGSPTFSVGVFREE*DGAGCSQAPPVRIQG--AHTSGPG 122
++GSP ++VG G G S APP + AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 509 LFGLVDLLDFVGYNQGKLGNLFNNVSXSLNERXDASSSN-GCCQGRSPLSEVDATVPAPP 333
L GL+ + N K +LF S ++R S N GC +PL + V PP
Sbjct: 395 LVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPP 454
Query: 332 G 330
G
Sbjct: 455 G 455
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -2
Query: 509 LFGLVDLLDFVGYNQGKLGNLFNNVSXSLNERXDASSSN-GCCQGRSPLSEVDATVPAPP 333
L GL+ + N K +LF S ++R S N GC +PL + V PP
Sbjct: 434 LVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPP 493
Query: 332 G 330
G
Sbjct: 494 G 494
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,345,364
Number of Sequences: 53049
Number of extensions: 462814
Number of successful extensions: 1620
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1615
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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