Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0560
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 112 2e-25
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 110 9e-25
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 107 8e-24
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 104 4e-23
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 102 2e-22
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 97 7e-21
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 87 9e-18
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 55 5e-08
01_06_0105 + 26507988-26508105,26509398-26509477,26509673-265097... 32 0.28
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 31 0.50
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 4.6
02_05_0552 - 29911280-29912541,29912633-29912762 28 6.1
02_05_0469 + 29297209-29297527,29297847-29297961,29298060-292982... 28 6.1
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 27 8.1
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 112 bits (270), Expect = 2e-25
Identities = 54/87 (62%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SW +IS IEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P
Sbjct: 276 NVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVP 335
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
++ PESKVFYLKMKGDYYRYLAE T
Sbjct: 336 SSTAPESKVFYLKMKGDYYRYLAEFKT 362
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYK 254
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYK 275
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 110 bits (264), Expect = 9e-25
Identities = 52/87 (59%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SW +IS IEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P
Sbjct: 58 NVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVP 117
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
++ PESKVFYLKMKGDYYRYLAE T
Sbjct: 118 SSTAPESKVFYLKMKGDYYRYLAEFKT 144
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYK 254
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYK 57
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 107 bits (256), Expect = 8e-24
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SW ++S IEQK EG +E + KEYR K+E EL +IC +L LLD HL+P
Sbjct: 52 NVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVP 111
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
++ ESKVFYLKMKGDY+RYLAE T
Sbjct: 112 SSTAAESKVFYLKMKGDYHRYLAEFKT 138
Score = 54.4 bits (125), Expect = 6e-08
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYK 254
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYK 51
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 104 bits (250), Expect = 4e-23
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SW +IS IEQK E G+E KEYR ++E EL +IC +L LLD HL+P
Sbjct: 57 NVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVP 116
Query: 428 KASNPESKVFYLKMKGDYYRYLAE 499
A+ ESKVFYLKMKGDY+RYLAE
Sbjct: 117 SATAAESKVFYLKMKGDYHRYLAE 140
Score = 54.8 bits (126), Expect = 5e-08
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYK 254
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYK
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYK 56
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 102 bits (244), Expect = 2e-22
Identities = 50/84 (59%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SW +IS IEQK EG A + YR K+E EL IC +L LLD HL+P
Sbjct: 35 NVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVP 94
Query: 428 KASNPESKVFYLKMKGDYYRYLAE 499
A ESKVFYLKMKGDY+RYLAE
Sbjct: 95 SAGAAESKVFYLKMKGDYHRYLAE 118
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 204 GVELSNEERNLLSVAYK 254
G EL+ EERNLLSVAYK
Sbjct: 18 GEELTVEERNLLSVAYK 34
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 97.5 bits (232), Expect = 7e-21
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+V+GARR+SW ++S IEQK EG + A+ YR +VE EL IC +L LLD+ L+P
Sbjct: 62 NVIGARRASWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVP 121
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVAT 508
A+ ++KVFYLKMKGDY+RYLAE T
Sbjct: 122 AAAAVDAKVFYLKMKGDYHRYLAEFKT 148
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Frame = +3
Query: 114 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYK 254
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYK
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYK 61
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 87.0 bits (206), Expect = 9e-18
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = +2
Query: 260 VGARRSSWXVIS*IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 439
+GARR+SW ++ +EQK ++ Y+ KVE ELR +C +VL ++ H +P A++
Sbjct: 53 IGARRASWRILESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANS 112
Query: 440 PESKVFYLKMKGDYYRYLAEVAT 508
E+ VF+ KMKGDYYRYLAE +T
Sbjct: 113 GENVVFFYKMKGDYYRYLAEFST 135
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +3
Query: 111 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 254
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFK 50
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 54.8 bits (126), Expect = 5e-08
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQK--TEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIP 427
+++GA+R++ +I IE K T+G E + EYR KVE E+ +IC DV+ ++DK
Sbjct: 29 NLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDK---- 84
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVATEXPDILL*RIHRXAYQ 556
KGDYYRYLAE T I + + AY+
Sbjct: 85 --------------KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 171 MAAAMKEVTETGVELSNEERNLLSVAYK 254
M AM V + L+ EERNLLSV YK
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYK 28
>01_06_0105 +
26507988-26508105,26509398-26509477,26509673-26509759,
26510446-26510496,26510581-26510698,26510820-26510924,
26511015-26511079,26511554-26511637,26511741-26511791,
26511874-26511936,26512016-26512062,26512155-26512233,
26512365-26512427,26512761-26512850,26512932-26513168,
26513372-26513457,26513664-26513685,26513686-26513766,
26513859-26513952,26514388-26514566
Length = 599
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 559 ILVCXSVNPLQQNVWXLCGHFCKVPV--VISFH 467
IL C S PL++NV FC VPV +I+ H
Sbjct: 229 ILACRSTEPLEENVKAKLSQFCHVPVSSIINLH 261
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 559 ILVCXSVNPLQQNVWXLCGHFCKVPV--VISFH 467
IL C S PL++NV FC VP+ +++ H
Sbjct: 194 ILACRSTQPLEENVKVKLAQFCHVPISNIVNLH 226
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +2
Query: 371 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 475
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 39 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 185
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
>02_05_0469 +
29297209-29297527,29297847-29297961,29298060-29298255,
29298427-29298540,29298695-29298868,29299326-29299520,
29299666-29299788,29299892-29300004,29300117-29300237,
29300363-29300623,29301712-29301921
Length = 646
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 410 DKHLIPKASNPESKVFYLKMK---GDYYRYLAEVATEXPDILL*RI 538
D +L+P +PES YL+M+ G Y E T+ P I+ RI
Sbjct: 275 DIYLLPPGEDPESCQSYLRMRNREGKYNLMFEEWVTDNPFIISPRI 320
>06_02_0041 +
10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 428 KASNPESKVFYLKMKGDYYRYLAEVATEXPDI 523
KA V YLK GD Y LA+V+T PD+
Sbjct: 340 KAVKATEDVSYLKADGDIYATLADVST--PDV 369
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,939,703
Number of Sequences: 37544
Number of extensions: 292111
Number of successful extensions: 843
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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