Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0560
(576 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 2e-26
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 84 9e-17
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 73 1e-13
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.6
SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 4.8
SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 27 8.3
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 115 bits (277), Expect = 2e-26
Identities = 61/107 (57%), Positives = 73/107 (68%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 433
+VVGA+RSSW VIS IEQK EGSERK+Q + YR +E EL E+C VL LL+ LIP A
Sbjct: 29 NVVGAKRSSWRVISSIEQKLEGSERKKQNTETYRQTIENELNEVCETVLKLLESKLIPNA 88
Query: 434 SNPESKVFYLKMKGDYYRYLAEVATEXPDILL*RIHRXAYQDAFEIS 574
+ ESKVFYLKMKGDYYRY EVA + + AY +A EI+
Sbjct: 89 QSTESKVFYLKMKGDYYRYEGEVAGADRRREVVQKAMKAYSEAQEIA 135
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = +3
Query: 171 MAAAMKEVTETGVELSNEERNLLSVAYK 254
MA AMKE TE L EERNLLSVAYK
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYK 28
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 433
++VG RRSSW VIS IE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A
Sbjct: 131 NIVGQRRSSWRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGA 188
Query: 434 SNPESKVFYLKMKGDYYRYLAE 499
+ E+KVFY K+KGDYYRYLAE
Sbjct: 189 EDEENKVFYFKLKGDYYRYLAE 210
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +3
Query: 102 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 254
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YK
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYK 130
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 83.8 bits (198), Expect = 9e-17
Identities = 49/106 (46%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKA 433
+VVGARRSSW VIS +EQK E + K+YR + EL C +VL +L+ +L+
Sbjct: 58 NVVGARRSSWRVISSMEQKAP--EEMAALTKKYREDITNELNGKCAEVLDILENYLLKDG 115
Query: 434 S---NPESKVFYLKMKGDYYRYLAEVATEXPDILL*RIHRXAYQDA 562
N E+KVFYLKM+GDY+RYL EVA R AY+DA
Sbjct: 116 QDDINTEAKVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDA 161
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/55 (60%), Positives = 40/55 (72%)
Frame = +3
Query: 90 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 254
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYK
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYK 57
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +3
Query: 111 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 254
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYK
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYK 50
Score = 70.5 bits (165), Expect = 9e-13
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +2
Query: 254 DVVGARRSSWXVIS*IEQKTEGSER---KQQMAKEYRVKVEKELREICYDVLGLLDKHLI 424
+V+GARR+SW +I+ IEQK E K +M + YR +E+EL+ IC ++L LLD LI
Sbjct: 51 NVIGARRASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLI 110
Query: 425 PKASNPESKVFYLKM 469
+ + ESKVFY K+
Sbjct: 111 KNSQSEESKVFYNKI 125
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +3
Query: 102 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYK 254
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YK
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYK 236
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 78 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 230
+SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 801
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 90 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKMS*VP 269
P + +++K E++QR Y ++ + G E S E+R L+ A+ +
Sbjct: 694 PYTQCNINKIEMIQRRAARFVFNDYSRYSSVSPMINSLGWE-SLEQRRQLNQAHMFYKIY 752
Query: 270 DGHHGVSFPKLNRK 311
+G G+SFP N K
Sbjct: 753 NGLVGISFPPENLK 766
>SB_39167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 93 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKMS*VPD 272
S TM ++ ++ ++ + A+R++ M E+ + VE+ +N S +M+
Sbjct: 850 SPTMGAERPRKMRMGRILKMAQRWN-MGGTYLELP-SAVEIDGVMKNQTSGYPRMTRARA 907
Query: 273 GHHGVSFPKLNRK 311
G + FPK NRK
Sbjct: 908 GCFVMRFPKFNRK 920
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 329 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 430
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_33946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 389 YDVLGLLDKHLIPKASNPESKVFYLKMKGDYY 484
YD ++ HL+P A +++ +K+ DYY
Sbjct: 6 YDSNTVVSHHLLPSAQTRYIRIYPVKVNSDYY 37
>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 159 RYDDMAAAMKEVTETGVELSNEERNLLSV 245
+YD++ AA+K+ T TG+ S + L V
Sbjct: 57 KYDNLLAAVKDATNTGIRESGIDARLCDV 85
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 159 RYDDMAAAMKEVTETGVELSNEERNLLSV 245
+YD++ AA+K+ T TG+ S + L V
Sbjct: 163 KYDNLLAAVKDATNTGIRESGIDARLCDV 191
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,094,337
Number of Sequences: 59808
Number of extensions: 326889
Number of successful extensions: 939
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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