Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0559
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   4.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 191 FYCFSFTNNRYVVWFQMSVKIIFYLNPMCMLPI*VGIIDYTL 66
           F CFS   +     F +   +IF++ P+ +L I   +I  TL
Sbjct: 223 FVCFSLVEDTLPCVFFLGSILIFFIFPLAILIIVYILIAKTL 264


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 63 WYDMYYYVLFFNLHIY 16
          WY+ YYY    N  +Y
Sbjct: 37 WYNPYYYQYLQNAALY 52


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 298 LNIRDP*SKSSCQDYQCNLEHNM 366
           L+IRD   +   + YQC  +H +
Sbjct: 185 LHIRDVGPEDGYKSYQCRTKHRL 207


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -3

Query: 67 LMV*YVLLCIIL*FTYLQIVTS 2
          ++V +V+ C++L F+Y   V+S
Sbjct: 1  MLVVFVVCCLLLMFSYTDNVSS 22


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +2

Query: 137 LTFGTKLRIYY**KKNSKRIFLNVIVQVVRECS 235
           +T G  + ++Y  K  +K I +  +VQ+  + +
Sbjct: 42  ITLGVAVSVFYRAKDYAKFIHIKAVVQITLDAT 74


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +2

Query: 137 LTFGTKLRIYY**KKNSKRIFLNVIVQVVRECS 235
           +T G  + ++Y  K  +K I +  +VQ+  + +
Sbjct: 42  ITLGVAVSVFYRAKDYAKFIHIKAVVQITLDAT 74


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 51  YYYVLFFNLHI 19
           YYY  FF +H+
Sbjct: 115 YYYYAFFGVHL 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,057
Number of Sequences: 336
Number of extensions: 3402
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)