Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0559
         (636 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0182 - 11552540-11552606,11552692-11552787,11553458-115535...    56   2e-08
05_01_0315 - 2468267-2468293,2469021-2469070,2469159-2469234,246...    30   1.3  
03_05_0559 - 25610474-25610951,25611149-25611890,25612355-256127...    29   3.1  
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581...    29   4.1  
03_02_0915 + 12360079-12360095,12360225-12361353                       27   9.4  

>10_06_0182 -
           11552540-11552606,11552692-11552787,11553458-11553528,
           11553660-11553764,11554149-11554239,11554331-11554381,
           11554478-11554566,11554667-11554909,11555027-11555190,
           11555883-11555988,11556075-11556242,11557456-11557494,
           11557582-11557713
          Length = 473

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = +3

Query: 519 FSVDQLMELAGLSVASAIAKVFPPSTHSSALIVCGPG 629
           FSVDQLMELAGLSVA+A+A+V+    H+  L++CGPG
Sbjct: 38  FSVDQLMELAGLSVAAAVAEVYKLGEHTRVLVICGPG 74


>05_01_0315 -
           2468267-2468293,2469021-2469070,2469159-2469234,
           2469498-2469575,2469967-2470048,2470146-2470238,
           2470564-2470673,2470831-2470893,2471293-2471344,
           2471421-2471545,2472681-2472794,2472917-2472961,
           2473278-2473337,2474725-2474778,2474944-2474992,
           2475071-2475252,2475349-2475404,2475491-2475584
          Length = 469

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188 YCFSFTNN-RYVVWFQMSVKIIFYLNPMCM-LPI*VGIIDYTLNGMICIIMYYSLIYIFT 15
           YC+S       +VW  +SV  + YL+  C+   + + +I+Y++   +  + Y S+ ++F 
Sbjct: 83  YCYSLKGRGASLVWLLLSVTYLCYLHGACVSFILLIALINYSI-VKVLEVAYLSIEHMFV 141

Query: 14  NCH 6
           + H
Sbjct: 142 DVH 144


>03_05_0559 -
           25610474-25610951,25611149-25611890,25612355-25612744,
           25613041-25613099,25613186-25613326,25613449-25613545,
           25614999-25615185
          Length = 697

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 481 LLTD*GTASQCCIDSYCSS*FRCYTVLLHATTKCLINVTYCALSYIDN 338
           ++ D    S+CC DS+C    R Y +     +KC+  V   A   I N
Sbjct: 273 VMADAVLTSKCCFDSFCDKCIRDYII---TQSKCICGVKVLADDLIPN 317


>01_06_0575 -
           30357556-30357582,30357698-30357944,30358039-30358161,
           30358275-30358301,30358475-30358633,30359764-30359948,
           30360225-30360293,30360432-30362354,30363018-30363339,
           30363506-30363543
          Length = 1039

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +3

Query: 435 YESMQHCDAVPQSVRSGSTGPGSFHEYKFSVDQLMELAGLSVASAIAKVFPPSTHSS 605
           Y+S+   D++P S  +G+     F E + SVD    L+     S  +K+ P  T +S
Sbjct: 480 YKSIPSQDSIPTSGLNGTFASNLFRESRKSVDTCTSLSKEDQCSWYSKLHPVCTPAS 536


>03_02_0915 + 12360079-12360095,12360225-12361353
          Length = 381

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -3

Query: 460 ASQCCIDSYCSS*FRCYTVLLHATTKCLINVTYCALSYIDNLGMMT 323
           AS+CC DS+C    RC    + A ++C       A   I N  + T
Sbjct: 187 ASKCCFDSFCD---RCIRDHIAAKSRCACGAQARAGDLIPNTTLRT 229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,088,644
Number of Sequences: 37544
Number of extensions: 284841
Number of successful extensions: 464
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)