Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0559
         (636 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45)       31   1.0  
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_44183| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_16640| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  

>SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45)
          Length = 811

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 465 PQSVRSGSTGPGSFHEYKFSVDQLMELAGLSVASAIAKVF 584
           P S R+ ST   +      SVDQ+M +AG S AS  AK +
Sbjct: 678 PDSTRAASTSRANISSV--SVDQIMSVAGWSSASTFAKFY 715


>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2680

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
 Frame = +3

Query: 456  DAVPQSVRSGSTGP----GSFHEYKF-SVD-----QLMELAGLSVASAIAKVFPPSTHSS 605
            D  P+SV++  T P    G   EY+  SV+     +++  AGLS+++++  + P + +S 
Sbjct: 996  DIQPRSVKASWTAPNAPNGILTEYRLLSVNNRNSSEIVHFAGLSLSASVDNLRPFTNYSF 1055

Query: 606  ALIVCGPG 629
             ++ C  G
Sbjct: 1056 TVVACNSG 1063


>SB_44183| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 751

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = -2

Query: 587 WEDLGNGTSNTQARKFHKLIDTKLVFMKRSWSSAAASD*LRYRVTVLH*FILLVI--VPM 414
           WE +  G   TQ RKF  LI    +F+    S     D + + +  +   +L ++   P 
Sbjct: 318 WEQINQGVQFTQTRKFFTLIP---IFLFMITSFYTKYDGIHFIINAVSLLLLSLVPKFPQ 374

Query: 413 LYSFATR 393
           +Y F+ R
Sbjct: 375 MYKFSYR 381


>SB_16640| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 447 QHCDAVPQSVRSGSTGPGSFHEYKFSVDQLMELAGLSV--ASAIAKVFPPSTHSSALIVC 620
           Q C  V + V S   G   +    +++D  M+ A  S   +  +AKVFP ++  S+++ C
Sbjct: 144 QECMIV-RKVASQGLGRKRWFAKSYTIDYTMDEASWSEYRSGGVAKVFPANSDDSSVVTC 202


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,261,042
Number of Sequences: 59808
Number of extensions: 367473
Number of successful extensions: 709
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)