Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0559
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I bind... 62 1e-09
BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I bind... 62 1e-09
BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I bind... 62 1e-09
BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein. 62 1e-09
AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I bind... 62 1e-09
AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I bind... 62 1e-09
AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I bind... 62 1e-09
AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein ... 62 1e-09
BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein. 35 0.28
BC032447-1|AAH32447.2| 1003|Homo sapiens WWC3 protein protein. 33 0.85
AB033106-1|BAA86594.1| 1032|Homo sapiens KIAA1280 protein protein. 33 0.85
>BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein.
Length = 260
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 260
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 245
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein
protein.
Length = 288
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/46 (63%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Frame = +3
Query: 504 FHEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPG 629
F+EY+FSVDQLMELAGLS A+AIAK +PP++ S + L++CGPG
Sbjct: 73 FNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLVICGPG 118
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 412 NIGTMTSSMNQCNTVTRYLNQSEAAALDQDLF 507
N G S +TV +YL+Q EA A+DQ+LF
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELF 73
>BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein.
Length = 254
Score = 34.7 bits (76), Expect = 0.28
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +3
Query: 510 EYKFSVDQLMELAGLSVASAIAKVFP-PS---THSSALIVCGP 626
+Y+F QL+EL G + A A+ K FP P+ + L+VCGP
Sbjct: 91 DYRFGRQQLVELCGHASAVAVTKAFPLPALSRKQRTVLVVCGP 133
>BC032447-1|AAH32447.2| 1003|Homo sapiens WWC3 protein protein.
Length = 1003
Score = 33.1 bits (72), Expect = 0.85
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 492 GPGSFHEYKFSVDQLMELAGLSVASAIAKVFPPST 596
GP FH+ + S+D LA LS S+++ + PPS+
Sbjct: 343 GPSGFHKQRRSLDTPQSLASLSSRSSLSSLSPPSS 377
>AB033106-1|BAA86594.1| 1032|Homo sapiens KIAA1280 protein protein.
Length = 1032
Score = 33.1 bits (72), Expect = 0.85
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 492 GPGSFHEYKFSVDQLMELAGLSVASAIAKVFPPST 596
GP FH+ + S+D LA LS S+++ + PPS+
Sbjct: 372 GPSGFHKQRRSLDTPQSLASLSSRSSLSSLSPPSS 406
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,429,277
Number of Sequences: 237096
Number of extensions: 1688997
Number of successful extensions: 2577
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2577
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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