Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0558
         (540 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57655 Cluster: PREDICTED: similar to CG1962-PA,...    45   0.001
UniRef50_Q9VIK6 Cluster: CG1962-PA, isoform A; n=2; Sophophora|R...    43   0.005
UniRef50_UPI00015B46C5 Cluster: PREDICTED: hypothetical protein;...    41   0.016
UniRef50_UPI0000519FE6 Cluster: PREDICTED: similar to CG1962-PA,...    38   0.15 
UniRef50_Q17EI5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.34 
UniRef50_Q8EYI5 Cluster: Dipeptide transport system permease pro...    34   2.4  
UniRef50_Q6D2H5 Cluster: Subunit S of type I restriction-modific...    33   5.6  

>UniRef50_UPI0000D57655 Cluster: PREDICTED: similar to CG1962-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG1962-PA, isoform A - Tribolium castaneum
          Length = 707

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = +3

Query: 15  WDIKQSTASQEIHKLRKLELSYAEVLRNAD 104
           ++ + S ASQE+HKL+KL+LSYAEV+R AD
Sbjct: 667 FEFRPSLASQELHKLKKLDLSYAEVVRKAD 696


>UniRef50_Q9VIK6 Cluster: CG1962-PA, isoform A; n=2; Sophophora|Rep:
           CG1962-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 790

 Score = 42.7 bits (96), Expect = 0.005
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = +3

Query: 30  STASQEIHKLRKLELSYAEVLRNAD 104
           +T SQ++HKL+KL+LSYAEVLR AD
Sbjct: 734 NTVSQDLHKLKKLDLSYAEVLRRAD 758


>UniRef50_UPI00015B46C5 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 781

 Score = 41.1 bits (92), Expect = 0.016
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +3

Query: 3   ETDTWDIKQSTASQEIHKLRKLELSYAEVLR 95
           E  T   K+ TAS+E+ KLR+LE+SYAEVLR
Sbjct: 728 EAGTESYKRGTASEEVAKLRRLEMSYAEVLR 758


>UniRef50_UPI0000519FE6 Cluster: PREDICTED: similar to CG1962-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG1962-PA, isoform A - Apis mellifera
          Length = 755

 Score = 37.9 bits (84), Expect = 0.15
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +3

Query: 18  DIKQSTASQEIHKLRKLELSYAEVLR 95
           D K STAS E+ +L++LE+SYAEVLR
Sbjct: 717 DYKPSTASVEVARLKRLEMSYAEVLR 742


>UniRef50_Q17EI5 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 778

 Score = 36.7 bits (81), Expect = 0.34
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +3

Query: 36  ASQEIHKLRKLELSYAEVLRNAD 104
           ++  +HKL+KL+LSYAEVLR AD
Sbjct: 738 SASNLHKLKKLDLSYAEVLRRAD 760


>UniRef50_Q8EYI5 Cluster: Dipeptide transport system permease
           protein dppC; n=4; Leptospira|Rep: Dipeptide transport
           system permease protein dppC - Leptospira interrogans
          Length = 359

 Score = 33.9 bits (74), Expect = 2.4
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -1

Query: 411 FGGKFVKIRYRVC*IYKNI-FIYSYLY-RAVTNSGFVLWQSTNRGYNSIGINSYLPDHKI 238
           FGGK   +  R+  I   I F+Y  L   A    GF +   T    + IGI+ Y+     
Sbjct: 183 FGGKTDILMQRIIEILSAIPFLYLILIVGAFFGRGFTVLLITYGALSWIGISYYMRGEFY 242

Query: 237 KLNYITYVQLAKTNGGWITRLLL 169
           KL  +TYV  AK  G    R++L
Sbjct: 243 KLKQLTYVDSAKALGVGSFRIML 265


>UniRef50_Q6D2H5 Cluster: Subunit S of type I
           restriction-modification system; n=1; Pectobacterium
           atrosepticum|Rep: Subunit S of type I
           restriction-modification system - Erwinia carotovora
           subsp. atroseptica (Pectobacterium atrosepticum)
          Length = 551

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -1

Query: 351 IYSYLYRAVTNSGFVLWQSTNRGYNSIGINSYLPDHKIKL---NYITYVQLAKTNGGWIT 181
           I+SY        G VLW ST  G  + G   YLP  K KL   +++T ++  + NG +I+
Sbjct: 157 IHSYTKDRFLKDGDVLWNSTGAG-GTAGRVIYLPVVKEKLVVDSHVTLIRTVRDNGKFIS 215

Query: 180 RLL 172
             +
Sbjct: 216 NYI 218


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,262,243
Number of Sequences: 1657284
Number of extensions: 8586834
Number of successful extensions: 17406
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17394
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)