Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0558
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   6.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 49  YTNSGSWSYPTPRCSETP 102
           Y N  S+S P P  S TP
Sbjct: 391 YANMNSYSVPEPTISTTP 408


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 18  DIKQSTASQEIHKLRKLELSYAEVLR 95
           DIK+    Q++ +++ LE    EVLR
Sbjct: 348 DIKKKPTYQDLQEMKYLERCVKEVLR 373


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 18  DIKQSTASQEIHKLRKLELSYAEVLR 95
           DIK+    Q++ +++ LE    EVLR
Sbjct: 348 DIKKKPTYQDLQEMKYLERCVKEVLR 373


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 285 GYNSIGINSYLPDHKIKLNYITYVQLAK 202
           G+N + I+   P+ K K N+IT ++  K
Sbjct: 137 GFNGLDIDWEYPEAKDKENFITLLREIK 164


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 11  HVGHKAEHRLAGNTQTQ 61
           ++GH  + ++  NTQTQ
Sbjct: 229 NMGHLTQQQIIHNTQTQ 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,130
Number of Sequences: 336
Number of extensions: 2463
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)