Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0558
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    26   0.28 
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    25   0.49 
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    25   0.49 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    25   0.49 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    25   0.49 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.6  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 315 GFVLWQSTNRGYNSIGINSYL-PDHKIKLNYITY 217
           G+ L+ S N      GI     PD KI++N+IT+
Sbjct: 78  GYFLYTSKNDNEEVCGIYFLAEPDQKIEINFITF 111


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = -1

Query: 327 VTNSGFVLWQSTNRGYNSIGINSYLPDHKIKLNYITYVQLAKTNGGWITRLLLEVRGVD 151
           +   G V W     G N+      +  H + +N  TY     T+G      L+ VR +D
Sbjct: 62  IPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTY-----TDGSDDYSTLIRVRVID 115


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = -1

Query: 327 VTNSGFVLWQSTNRGYNSIGINSYLPDHKIKLNYITYVQLAKTNGGWITRLLLEVRGVD 151
           +   G V W     G N+      +  H + +N  TY     T+G      L+ VR +D
Sbjct: 110 IPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTY-----TDGSDDYSTLIRVRVID 163


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = -1

Query: 327 VTNSGFVLWQSTNRGYNSIGINSYLPDHKIKLNYITYVQLAKTNGGWITRLLLEVRGVD 151
           +   G V W     G N+      +  H + +N  TY     T+G      L+ VR +D
Sbjct: 110 IPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTY-----TDGSDDYSTLIRVRVID 163


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 0.49
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = -1

Query: 327 VTNSGFVLWQSTNRGYNSIGINSYLPDHKIKLNYITYVQLAKTNGGWITRLLLEVRGVD 151
           +   G V W     G N+      +  H + +N  TY     T+G      L+ VR +D
Sbjct: 110 IPEQGVVNWNKIPEGANTTSTTKIIDGHVVAINETTY-----TDGSDDYSTLIRVRVID 163


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 3   ETDTWDIKQSTASQEI 50
           ETD W+++Q  A +EI
Sbjct: 240 ETDIWEVEQILAKKEI 255


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 5/27 (18%)
 Frame = +2

Query: 377 TRYRILTN-----FPPKHYDHRXEIIL 442
           ++Y+++T+      P  HYDH  EI++
Sbjct: 30  SKYQLITSTTLNWLPRTHYDHLKEIVI 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,352
Number of Sequences: 438
Number of extensions: 2912
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)