Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0556
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   1.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   2.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.8  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.0  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 131 DGKWSPSLIDVSNARGRAKP 190
           DG+W P +ID    +G  KP
Sbjct: 255 DGEWEPPMIDNPEYKGEWKP 274


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 112 ISIRPT*W*VVTVAHRRQQCQGQSQAAAYHKVLSASL 222
           +  RP    V  V  RRQ C+   QAA    +++A L
Sbjct: 592 VLFRPASCVVYFVRRRRQPCKAPDQAAVTRPLMAADL 628


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 125 PPDGKWSPSLIDVSNARG 178
           PPD  W P ++  +NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 55  LTIFSEILWLFFFYC 99
           L++  ++LW  FFYC
Sbjct: 284 LSLHGQLLWREFFYC 298


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 685  KAEMHDRFAT*CWYLPALFYQQMPDA 608
            K E HD +   C+Y+P    Q + DA
Sbjct: 1743 KFEPHDNWLPPCYYVPKELEQTLIDA 1768


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 675 CMTVSRHDAGTYPRSFINKCLMHFIFIVFLFYFL 574
           CM+V  H+      S + + L   IF+V LF ++
Sbjct: 550 CMSVVNHNFFKKRISIVLEFLPQIIFLVLLFAYM 583


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,771
Number of Sequences: 2352
Number of extensions: 12026
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)