Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0554
(616 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 60 3e-09
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 60 3e-09
AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p pro... 39 0.005
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P... 39 0.005
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P... 39 0.005
AY047545-1|AAK77277.1| 224|Drosophila melanogaster GH05836p pro... 29 3.8
AE013599-1930|AAF58225.1| 224|Drosophila melanogaster CG10139-P... 29 3.8
AY118274-1|AAM48303.1| 1443|Drosophila melanogaster AT03867p pro... 29 5.0
AE014296-1208|AAF50601.2| 1770|Drosophila melanogaster CG32387-P... 29 5.0
AE014296-1207|ABI31239.1| 1766|Drosophila melanogaster CG32387-P... 29 5.0
AE014296-1206|AAF50600.2| 1765|Drosophila melanogaster CG32387-P... 29 5.0
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 59.7 bits (138), Expect = 3e-09
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +1
Query: 10 ERXIIELKENGQAILNGASKGFPIIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKLEVCYI 189
E E+ +N LNG +P + A+R+ I + S YG+ + CTS L+VC+I
Sbjct: 2843 EGSYFEVADNLALKLNGNLVEYPQHLSGLHAWRR-FYTIHLYSEYGVGIVCTSDLKVCHI 2901
Query: 190 EANGFYLGKLRGLLGDGNNEP 252
NGFY K RGLLG+GN EP
Sbjct: 2902 NINGFYTSKTRGLLGNGNAEP 2922
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 255 DDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEXSHXQLHDASLPPAXEXVFGGXSPLR 434
DDF L +G + + + GN Y + + C + E + Q + +FG S L
Sbjct: 2924 DDFLLIDGTLAENSAALGNDYGVGK-CTAI---EFDNNQFKSSKREEMCSELFGIESTLA 2979
Query: 435 TLSLFMDXSPFRQAC 479
+ +D P+R+AC
Sbjct: 2980 FNFITLDSRPYRKAC 2994
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 59.7 bits (138), Expect = 3e-09
Identities = 34/81 (41%), Positives = 46/81 (56%)
Frame = +1
Query: 10 ERXIIELKENGQAILNGASKGFPIIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKLEVCYI 189
E E+ +N LNG +P + A+R+ I + S YG+ + CTS L+VC+I
Sbjct: 2843 EGSYFEVADNLALKLNGNLVEYPQHLSGLHAWRR-FYTIHLYSEYGVGIVCTSDLKVCHI 2901
Query: 190 EANGFYLGKLRGLLGDGNNEP 252
NGFY K RGLLG+GN EP
Sbjct: 2902 NINGFYTSKTRGLLGNGNAEP 2922
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +3
Query: 255 DDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEXSHXQLHDASLPPAXEXVFGGXSPLR 434
DDF L +G + + + GN Y + + C + E + Q + +FG S L
Sbjct: 2924 DDFLLIDGTLAENSAALGNDYGVGK-CTAI---EFDNNQFKSSKRQEMCSELFGIESTLA 2979
Query: 435 TLSLFMDXSPFRQAC 479
+ +D P+R+AC
Sbjct: 2980 FNFITLDSRPYRKAC 2994
>AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p
protein.
Length = 719
Score = 39.1 bits (87), Expect = 0.005
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 160 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEP 252
C + ++C+ E +G+Y G+ GLLG NNEP
Sbjct: 255 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEP 285
>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
isoform A protein.
Length = 4345
Score = 39.1 bits (87), Expect = 0.005
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 160 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEP 252
C + ++C+ E +G+Y G+ GLLG NNEP
Sbjct: 3881 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEP 3911
>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
isoform B protein.
Length = 4374
Score = 39.1 bits (87), Expect = 0.005
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 160 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEP 252
C + ++C+ E +G+Y G+ GLLG NNEP
Sbjct: 3910 CNVQFDLCWFEVSGWYFGRTAGLLGTLNNEP 3940
>AY047545-1|AAK77277.1| 224|Drosophila melanogaster GH05836p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 PKDS-RSSKRMCSLSVNQATESVLAHCTVSWSSAHLNLRCATLKLTASTWVNFAVFSETV 241
P DS R+ R C VN + AH + HLNL+ +K T + +N + S +
Sbjct: 26 PDDSYRAHCRFCKCCVNTKISDLRAHASTKKHMKHLNLK-QQIKTTDDSPLNRSSASSSS 84
Query: 242 TT 247
TT
Sbjct: 85 TT 86
>AE013599-1930|AAF58225.1| 224|Drosophila melanogaster CG10139-PA
protein.
Length = 224
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 PKDS-RSSKRMCSLSVNQATESVLAHCTVSWSSAHLNLRCATLKLTASTWVNFAVFSETV 241
P DS R+ R C VN + AH + HLNL+ +K T + +N + S +
Sbjct: 26 PDDSYRAHCRFCKCCVNTKISDLRAHASTKKHMKHLNLK-QQIKTTDDSPLNRSSASSSS 84
Query: 242 TT 247
TT
Sbjct: 85 TT 86
>AY118274-1|AAM48303.1| 1443|Drosophila melanogaster AT03867p protein.
Length = 1443
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 607 HLTHTFGSTAGRRPGQGQSCHSSSQITS 524
H+ + F TA R G+G+S SSQIT+
Sbjct: 938 HMEYQFWVTASTRVGEGKSSRVSSQITT 965
>AE014296-1208|AAF50601.2| 1770|Drosophila melanogaster CG32387-PA,
isoform A protein.
Length = 1770
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 607 HLTHTFGSTAGRRPGQGQSCHSSSQITS 524
H+ + F TA R G+G+S SSQIT+
Sbjct: 1247 HMEYQFWVTASTRVGEGKSSRVSSQITT 1274
>AE014296-1207|ABI31239.1| 1766|Drosophila melanogaster CG32387-PC,
isoform C protein.
Length = 1766
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 607 HLTHTFGSTAGRRPGQGQSCHSSSQITS 524
H+ + F TA R G+G+S SSQIT+
Sbjct: 1248 HMEYQFWVTASTRVGEGKSSRVSSQITT 1275
>AE014296-1206|AAF50600.2| 1765|Drosophila melanogaster CG32387-PB,
isoform B protein.
Length = 1765
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 607 HLTHTFGSTAGRRPGQGQSCHSSSQITS 524
H+ + F TA R G+G+S SSQIT+
Sbjct: 1247 HMEYQFWVTASTRVGEGKSSRVSSQITT 1274
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,044,325
Number of Sequences: 53049
Number of extensions: 526521
Number of successful extensions: 1272
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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