Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0553
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.1  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 232 FDFFVEILTPLSSPTIIHD-HSTYHTLLFSCLVPHNHRLIVSLINVTITYI 83
           F F V + T ++   +I D H++ + + F     H H++++ +    +TY+
Sbjct: 154 FAFQVLMCTSMNFVLLIGDLHTSIYIIFFDMFYQH-HKIVLDMGKNCVTYV 203


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +3

Query: 645 LATF-HFKCAFSVTLQARRS 701
           L TF HF C F +T+  R++
Sbjct: 26  LVTFAHFICLFPITINIRKN 45


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 213 ISTKKSKQSQHSFYATWK 266
           I  K  +Q +HSFY  +K
Sbjct: 27  IDEKIKRQERHSFYKIYK 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,396
Number of Sequences: 336
Number of extensions: 3643
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)