Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0549
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    29   0.055
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    29   0.055
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    29   0.055
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.89 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.6  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = -3

Query: 475 LQVTRIGRKNKTSTVT--VLTLSIAILLTLVIKPIFKKIDFINAFLNTPSYNSMYSVFIL 302
           L+  ++ R+N +S V   VL   I +  T+V   +   +DF+  +     Y  +YS FIL
Sbjct: 90  LENLKLDRENNSSFVVANVLFQLIHVYYTVVFT-LLLGVDFVKEYAF--EYIQLYSQFIL 146

Query: 301 YNMTYNLLDVLRYKISHM 248
           Y + +  L +L  K + +
Sbjct: 147 YFLLFATLKILLGKYTQL 164


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = -3

Query: 475 LQVTRIGRKNKTSTVT--VLTLSIAILLTLVIKPIFKKIDFINAFLNTPSYNSMYSVFIL 302
           L+  ++ R+N +S V   VL   I +  T+V   +   +DF+  +     Y  +YS FIL
Sbjct: 90  LENLKLDRENNSSFVVANVLFQLIHVYYTVVFT-LLLGVDFVKEYAF--EYIQLYSQFIL 146

Query: 301 YNMTYNLLDVLRYKISHM 248
           Y + +  L +L  K + +
Sbjct: 147 YFLLFATLKILLGKYTQL 164


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 0.055
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = -3

Query: 475 LQVTRIGRKNKTSTVT--VLTLSIAILLTLVIKPIFKKIDFINAFLNTPSYNSMYSVFIL 302
           L+  ++ R+N +S V   VL   I +  T+V   +   +DF+  +     Y  +YS FIL
Sbjct: 410 LENLKLDRENNSSFVVANVLFQLIHVYYTVVFT-LLLGVDFVKEYAF--EYIQLYSQFIL 466

Query: 301 YNMTYNLLDVLRYKISHM 248
           Y + +  L +L  K + +
Sbjct: 467 YFLLFATLKILLGKYTQL 484


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 546 CASQNLPPDRKRDQLRR 596
           CAS N  PD  +D LRR
Sbjct: 133 CASPNRKPDDNQDHLRR 149


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 322 MYSVFILYNMTYNLLDVLRYKISHMLLVLKN 230
           +YS F+   M Y +LD ++ K   M  +L N
Sbjct: 136 IYSQFLYGFMIYLILDTIKSKYRQMHRLLAN 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,644
Number of Sequences: 336
Number of extensions: 2760
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)