Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0549
         (777 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   3.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   7.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   7.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   7.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   7.3  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 397 TLVIKPIFKKIDFINAFLNTPSY 329
           TLV   + KK DFI  FL+  +Y
Sbjct: 454 TLVFVEMKKKADFIAVFLSENNY 476


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 316 SVFILYNMTYNLLDVLRYKISH 251
           S + +  M +NL+D   YK+ H
Sbjct: 107 SSYFVGKMYFNLIDTKCYKLEH 128


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 316 SVFILYNMTYNLLDVLRYKISH 251
           S + +  M +NL+D   YK+ H
Sbjct: 112 SSYFVGKMYFNLIDTKCYKLEH 133


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 300 YNIKTEYIELYDGVLRKAL 356
           +NIK +  +L DG+L  AL
Sbjct: 235 FNIKGDTFDLMDGILGLAL 253


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 316 SVFILYNMTYNLLDVLRYKISH 251
           S + +  M +NL+D   YK+ H
Sbjct: 112 SSYFVGKMYFNLIDTKCYKLEH 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,441
Number of Sequences: 438
Number of extensions: 3482
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)