Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0546
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0941 + 26179682-26182327                                         28   7.7  
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741...    28   7.7  
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    28   7.7  

>06_03_0941 + 26179682-26182327
          Length = 881

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 513 SNNKIMTYDLSSPISPSTEGHVSC 584
           S N  + ++L+ P+SPS  G V C
Sbjct: 579 SENGAIVFELTRPLSPSCSGRVEC 602


>05_07_0274 -
           28873531-28873644,28873727-28873981,28874111-28874179,
           28874277-28874415,28874511-28875076,28875225-28875326,
           28875425-28875491,28875576-28876072,28876148-28876212,
           28876470-28876567,28876652-28876694,28876870-28876963,
           28877325-28877360,28877454-28877542,28877667-28877788,
           28878193-28878404
          Length = 855

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 155 TEENYCTPQSHFAKEPKQKAKSRRRLKKHKENS 253
           T EN  +P+S   KE  +  +S+ + K+ KENS
Sbjct: 746 TAENSESPESKKEKENSENPESKEKEKERKENS 778


>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +2

Query: 194 KEPKQKAKSRRRLKKHKENSITCSQGPSITKNVTFQKRKKAQK 322
           K  + ++K   +L+KH  N+   S  P++ K  TF+K+ + +K
Sbjct: 608 KSDQIESKFHTQLEKHSNNATQNSGQPTLAKLDTFKKQVEEEK 650


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,439
Number of Sequences: 37544
Number of extensions: 245498
Number of successful extensions: 692
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)