Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0546
         (668 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)               28   7.9  
SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.9  
SB_1369| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.9  
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)                28   7.9  
SB_2357| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.9  

>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 399

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 207 CLGSLAKWLWGVQ*FSSVSDAEISDRSSNKGGFLSKFPDPI 85
           C+G  A W+W +   SSV+D      SS   G +     P+
Sbjct: 106 CIGEFAHWVWKIADISSVTDRLFGGSSSESTGHMVVVLSPL 146


>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1323

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 334 SSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDK 501
           S D  DD  + +R+K       HK     SS S++  +  +KA +++  K   +DK
Sbjct: 247 SIDSEDDRERKERKKKNKKEKKHKSKETSSSESNKSSDSEEKAKSKKNKKDKKNDK 302


>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
          Length = 909

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/78 (26%), Positives = 36/78 (46%)
 Frame = +2

Query: 191 AKEPKQKAKSRRRLKKHKENSITCSQGPSITKNVTFQKRKKAQKLF*NPATNQTMNTNLK 370
           A+E K+KA     L++  E    C+Q    T   T + +K+AQ L  N   ++ M    +
Sbjct: 328 AQEIKEKAMQLETLREESEYVKQCAQKEVDTLKETIRLQKEAQLLELNRDMSRIMELEAE 387

Query: 371 EESWLMLWLCIKRQTKSL 424
           +E    L    K + K++
Sbjct: 388 KEGLKELLEAEKDKMKAM 405


>SB_6481| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 610

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 2   EEFLLRQRLQVLENYNNVLERKKAKRSS 85
           E   L++R+Q LEN NN+L+ K  + +S
Sbjct: 293 ENIKLKKRVQELENENNILKAKNPELAS 320


>SB_1369| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 57

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = +2

Query: 203 KQKAKSRRRLKKHKENSITCSQ 268
           +Q+++ R+R ++H+  +I CSQ
Sbjct: 23  QQRSRGRKRARRHRRQTIVCSQ 44


>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
          Length = 2293

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = +1

Query: 331 ESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVE 510
           E + E  D  K    K  D      + ++  SL SR  +  +  VNR+  ++S+DDK+  
Sbjct: 344 EDNKERPDANKNDSLKSRDNKKGRTDDSKNDSLRSRDDKKERPVVNRDDSQSSIDDKEKR 403

Query: 511 VQIIK 525
             + K
Sbjct: 404 PDVNK 408


>SB_2357| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 62

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 263 STLSNFPYVFSVFDV 219
           STL +FPYVFSVF V
Sbjct: 18  STLHHFPYVFSVFRV 32


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,384,846
Number of Sequences: 59808
Number of extensions: 303876
Number of successful extensions: 995
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)