Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0546
         (668 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.                   31   4.9  
U04209-1|AAA92786.1|  439|Homo sapiens associated microfibrillar...    30   6.5  
BC050742-1|AAH50742.1|  439|Homo sapiens microfibrillar-associat...    30   6.5  
BC023557-1|AAH23557.1|  439|Homo sapiens microfibrillar-associat...    30   6.5  
BC005182-1|AAH05182.1|  253|Homo sapiens UTP11-like, U3 small nu...    30   8.6  
AL603790-7|CAH69932.1|  253|Homo sapiens UTP11-like, U3 small nu...    30   8.6  
AF151852-1|AAD34089.1|  253|Homo sapiens CGI-94 protein protein.       30   8.6  

>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
          Length = 4861

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +1

Query: 382  ADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSL 492
            A + VVH++   +++L   ++ M+++AV R P+K +L
Sbjct: 2548 ASSPVVHEDVEMRAALQFLMRHMVKRAVMRSPIKRAL 2584


>U04209-1|AAA92786.1|  439|Homo sapiens associated microfibrillar
           protein protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +1

Query: 328 LESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKV 507
           +ESSDE D+E++F  +K  +     +E  E SS   RL+ +  +       + +   K V
Sbjct: 50  MESSDEEDEEFQF-IKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIV 108

Query: 508 EVQII 522
           E +++
Sbjct: 109 EPEVV 113


>BC050742-1|AAH50742.1|  439|Homo sapiens microfibrillar-associated
           protein 1 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +1

Query: 328 LESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKV 507
           +ESSDE D+E++F  +K  +     +E  E SS   RL+ +  +       + +   K V
Sbjct: 50  MESSDEEDEEFQF-IKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIV 108

Query: 508 EVQII 522
           E +++
Sbjct: 109 EPEVV 113


>BC023557-1|AAH23557.1|  439|Homo sapiens microfibrillar-associated
           protein 1 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +1

Query: 328 LESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKV 507
           +ESSDE D+E++F  +K  +     +E  E SS   RL+ +  +       + +   K V
Sbjct: 50  MESSDEEDEEFQF-IKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIV 108

Query: 508 EVQII 522
           E +++
Sbjct: 109 EPEVV 113


>BC005182-1|AAH05182.1|  253|Homo sapiens UTP11-like, U3 small
           nucleolar ribonucleoprotein, (yeast) protein.
          Length = 253

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 340 DESDDE--YKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVE 510
           +++ DE  YK  R KL D V + KET E+ +   +LK M  + V    +K   + KK+E
Sbjct: 60  EKNPDEFYYKMTRVKLQDGVHIIKETKEEVT-PEQLKLMRTQDVKYIEMKRVAEAKKIE 117


>AL603790-7|CAH69932.1|  253|Homo sapiens UTP11-like, U3 small
           nucleolar ribonucleoprotein,e protein.
          Length = 253

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 340 DESDDE--YKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVE 510
           +++ DE  YK  R KL D V + KET E+ +   +LK M  + V    +K   + KK+E
Sbjct: 60  EKNPDEFYYKMTRVKLQDGVHIIKETKEEVT-PEQLKLMRTQDVKYIEMKRVAEAKKIE 117


>AF151852-1|AAD34089.1|  253|Homo sapiens CGI-94 protein protein.
          Length = 253

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 340 DESDDE--YKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVE 510
           +++ DE  YK  R KL D V + KET E+ +   +LK M  + V    +K   + KK+E
Sbjct: 60  EKNPDEFYYKMTRVKLQDGVHIIKETKEEVT-PEQLKLMRTQDVKYIEMKRVAEAKKIE 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,871,108
Number of Sequences: 237096
Number of extensions: 1422178
Number of successful extensions: 3391
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3391
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)