Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0546
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 31 0.98
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 1.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 1.7
U88309-4|AAB42330.1| 256|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 2.3
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 2.3
AC006681-5|AAK85491.1| 225|Caenorhabditis elegans Hypothetical ... 29 2.3
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 29 3.0
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81130-7|CAE17967.1| 199|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.9
U23510-3|AAC46782.1| 340|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical ... 27 9.1
AC024751-8|AAK21510.3| 369|Caenorhabditis elegans Hypothetical ... 27 9.1
AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 510 SSNNKIMTYDLSSPISPSTEGHVSCFEHRRP 602
SS + + T +L P PSTE S HRRP
Sbjct: 56 SSGSGLKTANLKHPARPSTESSTSSSHHRRP 86
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 510 SSNNKIMTYDLSSPISPSTEGHVSCFEHRRP 602
SS + + T +L P PSTE S HRRP
Sbjct: 56 SSGSGLKTANLKHPARPSTESSTSSSHHRRP 86
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 30.7 bits (66), Expect = 0.98
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 331 ESSDESDDEYKFKRR-KLADAVVVHKETNEKSSLSS-RLKEMLQKAVNREPLKTSLDDKK 504
+SSD SDD+ K K++ K + ++++ S SS K +K +++P K D++
Sbjct: 149 DSSDSSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSDDEKPKKKKKKSKKPKKAPKSDEE 208
Query: 505 VEVQIIK 525
V ++IIK
Sbjct: 209 VTIKIIK 215
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 343 ESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVEVQII 522
E + + + K+ ADAV KE NEK+ L + K K E +++ KKV + +
Sbjct: 13055 ELEKQAQIKKAAEADAVKKQKELNEKNKLEAAKKSAADKLKLEE--ESAAKSKKVSEESV 13112
Query: 523 K 525
K
Sbjct: 13113 K 13113
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 343 ESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVEVQII 522
E + + + K+ ADAV KE NEK+ L + K K E +++ KKV + +
Sbjct: 13055 ELEKQAQIKKAAEADAVKKQKELNEKNKLEAAKKSAADKLKLEE--ESAAKSKKVSEESV 13112
Query: 523 K 525
K
Sbjct: 13113 K 13113
>U88309-4|AAB42330.1| 256|Caenorhabditis elegans Hypothetical
protein T23B3.3 protein.
Length = 256
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 409 TNEKSSLSSRLKEMLQKAVNREPLKTSL 492
T EK S + KE+L KA+ +EP T+L
Sbjct: 149 TKEKLECSKKFKELLDKALAKEPKDTAL 176
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 331 ESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPL---KTSLDDK 501
ES DE+ ++ K ++RK + +EKS KE K ++PL K S D++
Sbjct: 234 ESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEE 293
Query: 502 KVEVQI 519
E +
Sbjct: 294 SEESDV 299
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 331 ESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPL---KTSLDDK 501
ES DE+ ++ K ++RK + +EKS KE K ++PL K S D++
Sbjct: 234 ESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEE 293
Query: 502 KVEVQI 519
E +
Sbjct: 294 SEESDV 299
>AC006681-5|AAK85491.1| 225|Caenorhabditis elegans Hypothetical
protein R13H9.1 protein.
Length = 225
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 409 TNEKSSLSSRLKEMLQKAVNREPLKTSL 492
T EK S + KE+L KA+ +EP T+L
Sbjct: 96 TKEKLECSKKFKELLDKALAKEPKDTAL 123
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 510 SSNNKIMTYDLSSPISPSTEGHVSCFEHRRP 602
SS + + T +L P PSTE S H+RP
Sbjct: 56 SSGSGLKTANLKHPARPSTESSTSSSHHQRP 86
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 144 LRQKLKRITARPKATLLKNPNKKQNHVED*KNIRKIR*RAPKDQVSQKMSR 296
L K + P A++++N N ++NH + + + R PK+ VS SR
Sbjct: 1227 LNLKFYSNSENPYASIVRNDNNRRNHSDPNQKSTERESRKPKEAVSHGNSR 1277
>Z81130-7|CAE17967.1| 199|Caenorhabditis elegans Hypothetical
protein T23G11.10 protein.
Length = 199
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 152 ETEENYCTPQSHFAKE---PKQKAKSRRRLKKHKENSITCSQGPSITKNVTFQKRKKAQK 322
+T E + AKE P + K K+K NS+ S + N+ F+K +K QK
Sbjct: 125 KTFEKSSKKNAEIAKERFGPVKTLKMGGVFPKNKANSVFWSPADIVAFNLMFRKARKTQK 184
Query: 323 L 325
L
Sbjct: 185 L 185
>Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 331 ESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPL 480
++S +SD E + +D HKE N +L ++ KE+ +K E L
Sbjct: 156 KASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRKEIEKKNAKNEAL 205
>Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 331 ESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPL 480
++S +SD E + +D HKE N +L ++ KE+ +K E L
Sbjct: 156 KASSDSDSEMDAAFHRPSDINRKHKEKNAMDALKNKRKEIEKKNAKNEAL 205
>U23510-3|AAC46782.1| 340|Caenorhabditis elegans Hypothetical
protein R12C12.3 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 274 WSLGARYRIFLMFFQSST*FCFLFGFFSK 188
W + A + IFL+ F +S+ F +GF K
Sbjct: 268 WEVFAEFTIFLIIFHTSSTFFIYYGFSEK 296
>AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical
protein F36H12.11 protein.
Length = 215
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 409 TNEKSSLSSRLKEMLQKAVNREPLKT 486
T EK S + KE+L KA+ +EP T
Sbjct: 96 TKEKLECSKKFKELLDKALAKEPKDT 121
>AC024751-8|AAK21510.3| 369|Caenorhabditis elegans Hypothetical
protein Y18H1A.7 protein.
Length = 369
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 173 TPQS-HFAKEPKQKAKSRRRLKKHKENSITCSQGPSITKNVTFQKRKKAQKLF*NPATNQ 349
+P+S FA++P + AKS +++K + S CS+ T N T + + A PAT Q
Sbjct: 143 SPKSPRFAEKPSEIAKSTPKIRKLVKISKICSEKLPKTANST--ENQDA------PATEQ 194
Query: 350 TMNTN 364
TM N
Sbjct: 195 TMLNN 199
>AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical
protein C09E7.10 protein.
Length = 208
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 269 GPSITKNVTFQKRKKAQKLF*NPATNQTMNTNLKEESW 382
GP NVT +K K QKL +P+T T LKE W
Sbjct: 61 GPEKENNVTLEKEKPKQKLI-DPSTFIT----LKENDW 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,334,985
Number of Sequences: 27780
Number of extensions: 241190
Number of successful extensions: 913
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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